RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 POLR2MP0CAP2 368 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 SCG2P13521 617 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 HOXA13P31271 388 aaPredicted RBP14.31□□□□□ -0.12
RNF40-211ENST00000567365 ZNF713Q8N859 430 aaPredicted RBP14.31□□□□□ -0.12
RNF40-211ENST00000567365 ANKLE1Q8NAG6 615 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 NSUN6Q8TEA1 469 aaKnown RBP14.31□□□□□ -0.12
RNF40-211ENST00000567365 IWS1Q96ST2 819 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 RMDN3Q96TC7 470 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 PDCD2LQ9BRP1 358 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 VTA1Q9NP79 307 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 PXMP2Q9NR77 195 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 RBM27Q9P2N5 1060 aaKnown RBP14.31□□□□□ -0.12
RNF40-211ENST00000567365 CNPY2Q9Y2B0 182 aa14.31□□□□□ -0.12
RNF40-211ENST00000567365 ESYT2A0FGR8 921 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 AKR1A1P14550 325 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 NKX3-2P78367 333 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 STK3Q13188 491 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 RABEP1Q15276 862 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 CCDC144BQ3MJ40 725 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 USP17L6PQ6QN14 398 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 HEATR3Q7Z4Q2 680 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 GTF3C6Q969F1 213 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 PDGFCQ9NRA1 345 aa14.3□□□□□ -0.12
RNF40-211ENST00000567365 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.29□□□□□ -0.12
RNF40-211ENST00000567365 ADAMTS3O15072 1205 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 CTAGE5O15320 804 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 ADAMTS4O75173 837 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 DUSP11O75319 330 aaKnown RBP14.29□□□□□ -0.12
RNF40-211ENST00000567365 NR3C2P08235 984 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 COL6A1P12109 1028 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 CNGA1P29973 690 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 TMEM63BQ5T3F8 832 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 ANO1Q5XXA6 986 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 VSIG10LQ86VR7 867 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 FBXO16Q8IX29 292 aaPredicted RBP14.29□□□□□ -0.12
RNF40-211ENST00000567365 IL27Q8NEV9 243 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 IL31RAQ8NI17 732 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 LENG1Q96BZ8 264 aaPredicted RBP14.29□□□□□ -0.12
RNF40-211ENST00000567365 SLC26A6Q9BXS9 759 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 ZMYND12Q9H0C1 365 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 SLKQ9H2G2 1235 aaPredicted RBP14.29□□□□□ -0.12
RNF40-211ENST00000567365 PSTPIP2Q9H939 334 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 RIC8AQ9NPQ8 531 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 ZHX1Q9UKY1 873 aaPredicted RBP14.29□□□□□ -0.12
RNF40-211ENST00000567365 FAM184BQ9ULE4 1060 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 GNEQ9Y223 722 aaKnown RBP14.29□□□□□ -0.12
RNF40-211ENST00000567365 STK36Q9NRP7 1315 aa14.29□□□□□ -0.12
RNF40-211ENST00000567365 PPFIA3O75145 1194 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 RGS20O76081 388 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 ADCYAP1R1P41586 468 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 CLK2P49760 499 aaKnown RBP14.28□□□□□ -0.12
RNF40-211ENST00000567365 FXR1P51114 621 aaKnown RBP eCLIP14.28□□□□□ -0.12
RNF40-211ENST00000567365 PGM5Q15124 567 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 CCDC62Q6P9F0 684 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 NECAB1Q8N987 351 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 KLHDC9Q8NEP7 349 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 UPF3AQ9H1J1 476 aaKnown RBP14.28□□□□□ -0.12
RNF40-211ENST00000567365 UPF2Q9HAU5 1272 aaKnown RBP14.28□□□□□ -0.12
RNF40-211ENST00000567365 LIMCH1Q9UPQ0 1083 aa14.28□□□□□ -0.12
RNF40-211ENST00000567365 SYNRGQ9UMZ2 1314 aa14.27□□□□□ -0.12
RNF40-211ENST00000567365 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 DEXIO95424 95 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 TFRCP02786 760 aaKnown RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 RARBP10826 455 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 FDPSP14324 419 aaKnown RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 SMPD1P17405 629 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 EIF2AK2P19525 551 aaKnown RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 NAPAP54920 295 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 MRPS9P82933 396 aaKnown RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 PDE4DQ08499 809 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 NPY5RQ15761 445 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 UBE2SQ16763 222 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 ARHGEF16Q5VV41 709 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 IQSEC1Q6DN90 963 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 CCSAPQ6IQ19 270 aaPredicted RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 EEPD1Q7L9B9 569 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 NSUN7Q8NE18 718 aaKnown RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 DIS3LQ8TF46 1054 aaKnown RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 CUL5Q93034 780 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 COLQQ9Y215 455 aaPredicted RBP14.27□□□□□ -0.13
RNF40-211ENST00000567365 ALPK3Q96L96 1907 aa14.27□□□□□ -0.13
RNF40-211ENST00000567365 SMCO2A6NFE2 343 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 B4DLN1 442 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 DNM1LO00429 736 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 CPLX1O14810 134 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 EIF3JO75822 258 aaKnown RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 ARIH2O95376 493 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 CD2BP2O95400 341 aaKnown RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 PTGS1P23219 599 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 CST5P28325 142 aaPredicted RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 MRPL12P52815 198 aaKnown RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 GJA9P57773 515 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 IRX5P78411 483 aaPredicted RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 TNFAIP2Q03169 654 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 SSRP1Q08945 709 aaKnown RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 LRRC41Q15345 812 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 STXBP2Q15833 593 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 DUSP28Q4G0W2 176 aa14.26□□□□□ -0.13
RNF40-211ENST00000567365 CPLX2Q6PUV4 134 aaKnown RBP14.26□□□□□ -0.13
RNF40-211ENST00000567365 NOL8Q76FK4 1167 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms