RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 CCDC196A0A1B0GTZ2 297 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 GCOM1H8Y6P7 765 aaPredicted RBP15.48■□□□□ 0.07
CLK3-218ENST00000566926 NKRFO15226 690 aaKnown RBP eCLIP15.48■□□□□ 0.07
CLK3-218ENST00000566926 ZEB2O60315 1214 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 PPP1R11O60927 126 aaPredicted RBP15.48■□□□□ 0.07
CLK3-218ENST00000566926 POLR2MP0CAP2 368 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 RXRAP19793 462 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 NKX3-2P78367 333 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 COL9A3Q14050 684 aaPredicted RBP15.48■□□□□ 0.07
CLK3-218ENST00000566926 LRRC26Q2I0M4 334 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 SLC35G1Q2M3R5 365 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 GNASQ5JWF2 1037 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 ARHGEF16Q5VV41 709 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 SLC39A5Q6ZMH5 540 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 C7orf61Q8IZ16 206 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 SRBD1Q8N5C6 995 aaKnown RBP15.48■□□□□ 0.07
CLK3-218ENST00000566926 LENG1Q96BZ8 264 aaPredicted RBP15.48■□□□□ 0.07
CLK3-218ENST00000566926 TCEANC2Q96MN5 208 aa15.48■□□□□ 0.07
CLK3-218ENST00000566926 KLF18A0A0U1RQI7 1052 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 RBM47A0AV96 593 aaKnown RBP15.47■□□□□ 0.07
CLK3-218ENST00000566926 PLEKHA8P1O95397 391 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 ATN1P54259 1190 aaPredicted RBP15.47■□□□□ 0.07
CLK3-218ENST00000566926 STXBP2Q15833 593 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 KCNA10Q16322 511 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 RTN1Q16799 776 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 DUSP28Q4G0W2 176 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 C1orf53Q5VUE5 145 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 Q6ZUG5 572 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 TMTC3Q6ZXV5 915 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 TLK2Q86UE8 772 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 SCFD2Q8WU76 684 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 PIBF1Q8WXW3 757 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 CUL5Q93034 780 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 FERMT2Q96AC1 680 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 ZSCAN31Q96LW9 406 aaPredicted RBP15.47■□□□□ 0.07
CLK3-218ENST00000566926 GLT1D1Q96MS3 346 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 TAAR1Q96RJ0 339 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 WDR11Q9BZH6 1224 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 PDGFCQ9NRA1 345 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 LIMCH1Q9UPQ0 1083 aa15.47■□□□□ 0.07
CLK3-218ENST00000566926 GNEQ9Y223 722 aaKnown RBP15.47■□□□□ 0.07
CLK3-218ENST00000566926 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.46■□□□□ 0.07
CLK3-218ENST00000566926 A0A1W2PQ45 241 aaPredicted RBP15.46■□□□□ 0.07
CLK3-218ENST00000566926 A0A1W2PQY0 241 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 GOLGA8AA7E2F4 631 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 GOLGA8BA8MQT2 603 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 OPLAHO14841 1288 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 HSP90AA1P07900 732 aaKnown RBP15.46■□□□□ 0.07
CLK3-218ENST00000566926 SMPD1P17405 629 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 ACLYP53396 1101 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 TTLL4Q14679 1199 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 BRDTQ58F21 947 aaPredicted RBP15.46■□□□□ 0.07
CLK3-218ENST00000566926 STARD7Q9NQZ5 370 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 PXMP2Q9NR77 195 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 SH2B1Q9NRF2 756 aaPredicted RBP15.46■□□□□ 0.07
CLK3-218ENST00000566926 COL20A1Q9P218 1284 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 PRKAG2Q9UGJ0 569 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 BRPF3Q9ULD4 1205 aa15.46■□□□□ 0.07
CLK3-218ENST00000566926 NAP1L2Q9ULW6 460 aaPredicted RBP15.46■□□□□ 0.07
CLK3-218ENST00000566926 ELP1O95163 1332 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 DYNC1LI2O43237 492 aaPredicted RBP15.45■□□□□ 0.06
CLK3-218ENST00000566926 ADCY6O43306 1168 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 EIF3JO75822 258 aaKnown RBP15.45■□□□□ 0.06
CLK3-218ENST00000566926 CABYRO75952 493 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 ASGR1P07306 291 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 NR3C2P08235 984 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 EIF2AK2P19525 551 aaKnown RBP15.45■□□□□ 0.06
CLK3-218ENST00000566926 RTP1P59025 263 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 SNX17Q15036 470 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 CCSAPQ6IQ19 270 aaPredicted RBP15.45■□□□□ 0.06
CLK3-218ENST00000566926 RAB11FIP4Q86YS3 637 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 CCDC82Q8N4S0 544 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 BRF1Q92994 677 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 AGXT2Q9BYV1 514 aa15.45■□□□□ 0.06
CLK3-218ENST00000566926 DDX49Q9Y6V7 483 aaKnown RBP15.45■□□□□ 0.06
CLK3-218ENST00000566926 hCG_1984214I3L0E3 225 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 TXNP10599 105 aaKnown RBP15.44■□□□□ 0.06
CLK3-218ENST00000566926 CPA1P15085 419 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 HOXA13P31271 388 aaPredicted RBP15.44■□□□□ 0.06
CLK3-218ENST00000566926 CPT1AP50416 773 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 METAP2P50579 478 aaKnown RBP eCLIP15.44■□□□□ 0.06
CLK3-218ENST00000566926 AK2P54819 239 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 FSCN1Q16658 493 aaKnown RBP15.44■□□□□ 0.06
CLK3-218ENST00000566926 KCNV1Q6PIU1 500 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 TEX2Q8IWB9 1127 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 CMTR1Q8N1G2 835 aaKnown RBP15.44■□□□□ 0.06
CLK3-218ENST00000566926 ZNF713Q8N859 430 aaPredicted RBP15.44■□□□□ 0.06
CLK3-218ENST00000566926 SMARCC2Q8TAQ2 1214 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 VTI1AQ96AJ9 217 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 INTS4Q96HW7 963 aaKnown RBP15.44■□□□□ 0.06
CLK3-218ENST00000566926 PDCD2LQ9BRP1 358 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 SEZ6LQ9BYH1 1024 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 ATP11BQ9Y2G3 1177 aa15.44■□□□□ 0.06
CLK3-218ENST00000566926 MROH7Q68CQ1 1323 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 MYADML2A6NDP7 307 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 CD2BP2O95400 341 aaKnown RBP15.43■□□□□ 0.06
CLK3-218ENST00000566926 CCND2P30279 289 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 APOBRQ0VD83 1088 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 FCHSD1Q86WN1 690 aa15.43■□□□□ 0.06
CLK3-218ENST00000566926 OR6J1Q8NGC5 347 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms