RNA–Protein interactions for RNA: ENST00000565224.5

SMG1-210, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-210ENST00000565224 CENPPQ6IPU0 288 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 CCDC70Q6NSX1 233 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 SV2BQ7L1I2 683 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 PTF1AQ7RTS3 328 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 CERS3Q8IU89 383 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 GOLGA6L1Q8N7Z2 621 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 TRIM58Q8NG06 486 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 TBCKQ8TEA7 893 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 COG1Q8WTW3 980 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 EYA3Q99504 573 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 FAM204AQ9H8W3 233 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 ANKIB1Q9P2G1 1089 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 LRWD1Q9UFC0 647 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 PLAGL2Q9UPG8 496 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 LEMD3Q9Y2U8 911 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 JRKLQ9Y4A0 524 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 DUSP10Q9Y6W6 482 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 ZNF831Q5JPB2 1677 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 CCDC88AQ3V6T2 1871 aa8.08□□□□□ -1.12
SMG1-210ENST00000565224 SNED1Q8TER0 1413 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ABCB11O95342 1321 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ESYT2A0FGR8 921 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 PDE2AO00408 941 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 ZNF263O14978 683 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ZNF185O15231 689 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ZPR1O75312 459 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 TACC1O75410 805 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 SYF2O95926 243 aaKnown RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 SMARCA1P28370 1054 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 CDK8P49336 464 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 GRIK5Q16478 980 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 C16orf86Q6ZW13 317 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 UNC13DQ70J99 1090 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 REXO1Q8N1G1 1221 aaKnown RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 NEDD1Q8NHV4 660 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 HPS3Q969F9 1004 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 RTFDC1Q9BY42 306 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 IFIH1Q9BYX4 1025 aaKnown RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 NDST4Q9H3R1 872 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 SH2D4AQ9H788 454 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 SLC39A2Q9NP94 309 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 STK17AQ9UEE5 414 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 SNX12Q9UMY4 172 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 SIK3Q9Y2K2 1263 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 COL24A1Q17RW2 1714 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ZC3H4Q9UPT8 1303 aaKnown RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 A0A0U1RQG5 324 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 PVALEFA0A1B0GWK0 134 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 hCG_1984214I3L0E3 225 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 NKRFO15226 690 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMG1-210ENST00000565224 RPS6KA4O75676 772 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 PRPF6O94906 941 aaKnown RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 FGFR1OPO95684 399 aaKnown RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 PLEKP08567 350 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 ITIH3Q06033 890 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 SLC20A2Q08357 652 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 C2orf54Q08AI8 447 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 GRB10Q13322 594 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 CALCRLQ16602 461 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 MAN2A1Q16706 1144 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 RC3H1Q5TC82 1133 aaKnown RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 USP17L2Q6R6M4 530 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 CCNI2Q6ZMN8 369 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 KRT26Q7Z3Y9 468 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ZNF804AQ7Z570 1209 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 CCDC84Q86UT8 332 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 C2CD5Q86YS7 1000 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 MMGT1Q8N4V1 131 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ZNF713Q8N859 430 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 AFAP1L1Q8TED9 768 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 PIGSQ96S52 555 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 CRACR2AQ9BSW2 395 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 SELENOOQ9BVL4 669 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 BLOC1S4Q9NUP1 217 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 ARHGAP20Q9P2F6 1191 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 BIN2Q9UBW5 565 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 FEZ2Q9UHY8 353 aaPredicted RBP8.07□□□□□ -1.12
SMG1-210ENST00000565224 PCDHA13Q9Y5I0 950 aa8.07□□□□□ -1.12
SMG1-210ENST00000565224 MYMKA6NI61 221 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 ZMYND10O75800 440 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 LCA5LO95447 670 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 PRLRP16471 622 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 HOXA7P31268 230 aaPredicted RBP8.06□□□□□ -1.12
SMG1-210ENST00000565224 TXKP42681 527 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 BTDP43251 543 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 FXR2P51116 673 aaKnown RBP eCLIP8.06□□□□□ -1.128e-7■□□□□ 10.7
SMG1-210ENST00000565224 KIF11P52732 1056 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 TMEM266Q2M3C6 531 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 ZNF572Q7Z3I7 529 aaPredicted RBP8.06□□□□□ -1.12
SMG1-210ENST00000565224 SRLQ86TD4 932 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 CREG2Q8IUH2 290 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 GUF1Q8N442 669 aaKnown RBP8.06□□□□□ -1.12
SMG1-210ENST00000565224 LARP4BQ92615 738 aaKnown RBP8.06□□□□□ -1.12
SMG1-210ENST00000565224 RUBCNQ92622 972 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 CDK5RAP3Q96JB5 506 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 PNMA5Q96PV4 448 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 ALS2CR12Q96Q35 445 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 MTMR9Q96QG7 549 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 DEF6Q9H4E7 631 aa8.06□□□□□ -1.12
SMG1-210ENST00000565224 VAT1LQ9HCJ6 419 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms