RNA–Protein interactions for RNA: ENST00000564970.1

PTPN9-204, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 5

Gene PTPN9, Length 726 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-204ENST00000564970 LURAP1LQ8IV03 231 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 TMEM139Q8IV31 216 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 MMGT1Q8N4V1 131 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 AGAP11Q8TF27 550 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 GIPC2Q8TF65 315 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 RUFY2Q8WXA3 655 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 ATRIPQ8WXE1 791 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 MAML1Q92585 1016 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 APPBP2Q92624 585 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 SEC16BQ96JE7 1060 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 NEK1Q96PY6 1258 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 HAUS7Q99871 368 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 PTTG2Q9NZH5 202 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 IFNKQ9P0W0 207 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 SQORQ9Y6N5 450 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 PDS5AQ29RF7 1337 aaKnown RBP6.89□□□□□ -1.31
PTPN9-204ENST00000564970 WDR17Q8IZU2 1322 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 ZNF335Q9H4Z2 1342 aaPredicted RBP6.89□□□□□ -1.31
PTPN9-204ENST00000564970 BCL9O00512 1426 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 FRMPD1Q5SYB0 1578 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 ALKQ9UM73 1620 aa6.89□□□□□ -1.31
PTPN9-204ENST00000564970 SIGLEC1Q9BZZ2 1709 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ZCCHC11Q5TAX3 1644 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ABCA9Q8IUA7 1624 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 USP32Q8NFA0 1604 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ABCC4O15439 1325 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 KANSL1LA0AUZ9 987 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 O00370 1275 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 MAP3K7O43318 606 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 HNRNPCL1O60812 293 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ITGA2BP08514 1039 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 RHOXF2BP0C7M4 288 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ENDOUP21128 410 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 CA8P35219 290 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 UBASH3AP57075 661 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 NLRP12P59046 1061 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 DR1Q01658 176 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 OCRLQ01968 901 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 GUCY1B3Q02153 619 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 EVX2Q03828 476 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 PDCLQ13371 301 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 RASGRF1Q13972 1273 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 TRIM14Q14142 442 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 CAMK4Q16566 473 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 PARP6Q2NL67 630 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ZCWPW2Q504Y3 356 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 AGBL2Q5U5Z8 902 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 KIAA1841Q6NSI8 718 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 TMEM154Q6P9G4 183 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 CYP26C1Q6V0L0 522 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 C11orf57Q6ZUT1 292 aaPredicted RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 RASGRP2Q7LDG7 609 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 PPP1R42Q7Z4L9 355 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 PPFIBP1Q86W92 1011 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 KIRREL3Q8IZU9 778 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ESX1Q8N693 406 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 AOPEPQ8N6M6 819 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ENDOVQ8N8Q3 282 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 MLKLQ8NB16 471 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 SLC43A3Q8NBI5 491 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 RBBP8NLQ8NC74 664 aaPredicted RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 LINS1Q8NG48 757 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 CDKL2Q92772 493 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 DPF3Q92784 378 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 C8orf76Q96K31 380 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 ATP6V1G3Q96LB4 118 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 RHOXF2Q9BQY4 288 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 SPATA16Q9BXB7 569 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 UNKQ9C0B0 810 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 RAB17Q9H0T7 212 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 DHX36Q9H2U1 1008 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 TAF1DQ9H5J8 278 aaPredicted RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 PIH1D3Q9NQM4 214 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 FAIMQ9NVQ4 179 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 HYPKQ9NX55 129 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 BTBD7Q9P203 1132 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 KIAA1468Q9P260 1216 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 THEGQ9P2T0 379 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 RNF14Q9UBS8 474 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 PPP1R1BQ9UD71 204 aaPredicted RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 STK17AQ9UEE5 414 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 FAM32AQ9Y421 112 aaKnown RBP6.88□□□□□ -1.31
PTPN9-204ENST00000564970 NUMBLQ9Y6R0 609 aa6.88□□□□□ -1.31
PTPN9-204ENST00000564970 GOLGA8CPA6NN73 597 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 PSMD14O00487 310 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 FANCGO15287 622 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 VAMP4O75379 141 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 TRPA1O75762 1119 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 ALDH1L1O75891 902 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 LCA5LO95447 670 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 SSBP05455 408 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPN9-204ENST00000564970 PRLRP16471 622 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 EIF2S2P20042 333 aaKnown RBP6.87□□□□□ -1.31
PTPN9-204ENST00000564970 GJB2P29033 226 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 HNRNPMP52272 730 aaKnown RBP eCLIP6.87□□□□□ -1.31
PTPN9-204ENST00000564970 USP46P62068 366 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 HPCAP84074 193 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 AMPD2Q01433 879 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 MYL5Q02045 173 aa6.87□□□□□ -1.31
PTPN9-204ENST00000564970 DMPKQ09013 629 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms