RNA–Protein interactions for RNA: ENST00000564870.1

FANCA-216, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-216ENST00000564870 LCHNA4D1U4 455 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 A6NJR5 290 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 FOXP2O15409 715 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 KPNA6O60684 536 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 KCNJ6P48051 423 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 PWP2Q15269 919 aaKnown RBP12.09□□□□□ -0.47
FANCA-216ENST00000564870 BTNL9Q6UXG8 535 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 RNF207Q6ZRF8 634 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 TMCO2Q7Z6W1 182 aaPredicted RBP12.09□□□□□ -0.47
FANCA-216ENST00000564870 OTUD7AQ8TE49 926 aaPredicted RBP12.09□□□□□ -0.47
FANCA-216ENST00000564870 SCFD2Q8WU76 684 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 CLEC4DQ8WXI8 215 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 KHSRPQ92945 711 aaKnown RBP eCLIP12.09□□□□□ -0.47
FANCA-216ENST00000564870 ZBED2Q9BTP6 218 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 TOMM22Q9NS69 142 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 RCAN3Q9UKA8 241 aa12.09□□□□□ -0.47
FANCA-216ENST00000564870 LCTP09848 1927 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 FAM86C2PA6NEL3 165 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 NKRFO15226 690 aaKnown RBP eCLIP12.08□□□□□ -0.48
FANCA-216ENST00000564870 LPXNO60711 386 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 BAIAP3O94812 1187 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 TXNP10599 105 aaKnown RBP12.08□□□□□ -0.48
FANCA-216ENST00000564870 RPS6P62753 249 aaKnown RBP12.08□□□□□ -0.48
FANCA-216ENST00000564870 PTPN11Q06124 597 aaPredicted RBP12.08□□□□□ -0.48
FANCA-216ENST00000564870 PTGISQ16647 500 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 PI4K2BQ8TCG2 481 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 GDPD5Q8WTR4 605 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 MPHOSPH6Q99547 160 aaKnown RBP12.08□□□□□ -0.48
FANCA-216ENST00000564870 TMEM47Q9BQJ4 181 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 SCN10AQ9Y5Y9 1956 aa12.08□□□□□ -0.48
FANCA-216ENST00000564870 ORC4O43929 436 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 ARIH2O95376 493 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 TOP1P11387 765 aaKnown RBP12.07□□□□□ -0.48
FANCA-216ENST00000564870 EDNRBP24530 442 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 NOVP48745 357 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 WDR5P61964 334 aaKnown RBP12.07□□□□□ -0.48
FANCA-216ENST00000564870 RRP12Q5JTH9 1297 aaKnown RBP12.07□□□□□ -0.48
FANCA-216ENST00000564870 VPS53Q5VIR6 699 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 CCDC155Q8N6L0 562 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 ANAPC4Q9UJX5 808 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 MTUS1Q9ULD2 1270 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 ARIH1Q9Y4X5 557 aaPredicted RBP12.07□□□□□ -0.48
FANCA-216ENST00000564870 TTC41PQ6P2S7 1318 aa12.07□□□□□ -0.48
FANCA-216ENST00000564870 RBAK-RBAKDNI3L0D1 243 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 SELPP16109 830 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 DEFB103AP81534 67 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 GPNMBQ14956 572 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 GDF6Q6KF10 455 aaPredicted RBP12.06□□□□□ -0.48
FANCA-216ENST00000564870 DNERQ8NFT8 737 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 CAGE1Q8TC20 777 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 AFAP1L1Q8TED9 768 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 CTAGE1Q96RT6 745 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 CD320Q9NPF0 282 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 C11orf16Q9NQ32 467 aa12.06□□□□□ -0.48
FANCA-216ENST00000564870 B4DLN1 442 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 GPR37L1O60883 481 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 FGRP09769 529 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 PDHBP11177 359 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 MRPL12P52815 198 aaKnown RBP12.05□□□□□ -0.48
FANCA-216ENST00000564870 LY6KQ17RY6 165 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 TCTN1Q2MV58 587 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 USH1GQ495M9 461 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 SEPT14Q6ZU15 432 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 LRRC8DQ7L1W4 858 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 CHST3Q7LGC8 479 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 DHX38Q92620 1227 aaKnown RBP12.05□□□□□ -0.48
FANCA-216ENST00000564870 RAD9AQ99638 391 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 LMCD1Q9NZU5 365 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
FANCA-216ENST00000564870 PI4K2BG5E9Z4 385 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 NBNO60934 754 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 GH1P01241 217 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 MMP3P08254 477 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 ZNF543Q08ER8 600 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 ALX1Q15699 326 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 FAM117BQ6P1L5 589 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 CCDC62Q6P9F0 684 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 CNKSR3Q6P9H4 555 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 TBC1D5Q92609 795 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 KAT2BQ92831 832 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 TGS1Q96RS0 853 aaKnown RBP12.04□□□□□ -0.48
FANCA-216ENST00000564870 CRBNQ96SW2 442 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 UBE2ZQ9H832 354 aaPredicted RBP12.04□□□□□ -0.48
FANCA-216ENST00000564870 SUGCTQ9HAC7 445 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 TCP11L1Q9NUJ3 509 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 TRIP12Q14669 1992 aaPredicted RBP12.04□□□□□ -0.48
FANCA-216ENST00000564870 WDR19Q8NEZ3 1342 aa12.04□□□□□ -0.48
FANCA-216ENST00000564870 LINC01553A4QN01 128 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 GJB5O95377 273 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 FGAP02671 866 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 CXCL10P02778 98 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 GOLGA8HP0CJ92 632 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 CKBP12277 381 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 MX1P20591 662 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 CASTP20810 708 aaKnown RBP12.03□□□□□ -0.48
FANCA-216ENST00000564870 KCNA5P22460 613 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 ERVK-21P61565 698 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 ARHGAP1Q07960 439 aa12.03□□□□□ -0.48
FANCA-216ENST00000564870 SESTD1Q86VW0 696 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms