RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 NEK8Q86SG6 692 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 CPXCR1Q8N123 301 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 FAM133AQ8N9E0 248 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 OXER1Q8TDS5 423 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 SYTL5Q8TDW5 730 aaPredicted RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 TNPO1Q92973 898 aaKnown RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 ZNF396Q96N95 335 aaPredicted RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 ANO3Q9BYT9 981 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 SCAND2PQ9GZW5 306 aaPredicted RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 A1CFQ9NQ94 594 aaKnown RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 CYP39A1Q9NYL5 469 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 RTEL1Q9NZ71 1219 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 NOL7Q9UMY1 257 aaKnown RBP8.55□□□□□ -1.04
GINS3-205ENST00000564814 PLXNA1Q9UIW2 1896 aa8.55□□□□□ -1.04
GINS3-205ENST00000564814 CCDC194A0A1B0GVG4 234 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 SPDYE3A6NKU9 549 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 TBX3O15119 743 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 IGHA2P01877 340 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 HOXC6P09630 235 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 ALAS1P13196 640 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 ERCC3P19447 782 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 PRPHP41219 470 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 TOB1P50616 345 aaPredicted RBP8.54□□□□□ -1.04
GINS3-205ENST00000564814 GUCY1B3Q02153 619 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 MKRN3Q13064 507 aaKnown RBP8.54□□□□□ -1.04
GINS3-205ENST00000564814 GRB14Q14449 540 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 EARS2Q5JPH6 523 aaKnown RBP8.54□□□□□ -1.04
GINS3-205ENST00000564814 ARL6IP4Q66PJ3 421 aaKnown RBP8.54□□□□□ -1.04
GINS3-205ENST00000564814 RNF207Q6ZRF8 634 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 MSL3Q8N5Y2 521 aaKnown RBP8.54□□□□□ -1.04
GINS3-205ENST00000564814 LINC00301Q8NCQ3 95 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 PIBF1Q8WXW3 757 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 GBP4Q96PP9 640 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 IWS1Q96ST2 819 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
GINS3-205ENST00000564814 DOCK3Q8IZD9 2030 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 KIAA1217Q5T5P2 1943 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 SLC15A5A6NIM6 579 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 ADAMTS3O15072 1205 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 MAFGO15525 162 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 DTNBO60941 627 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 PPP6R2O75170 966 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 BAG4O95429 457 aaKnown RBP8.53□□□□□ -1.04
GINS3-205ENST00000564814 CFBP00751 764 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 GNRH1P01148 92 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 FCER1AP12319 257 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 SNAP25P60880 206 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 ARHGAP4P98171 946 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 ATP2C1P98194 919 aaPredicted RBP8.53□□□□□ -1.04
GINS3-205ENST00000564814 CRHR2Q13324 411 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 GNL2Q13823 731 aaKnown RBP8.53□□□□□ -1.04
GINS3-205ENST00000564814 SLC39A14Q15043 492 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 PTPAQ15257 358 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 CSPP1Q1MSJ5 1256 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 Q4G0T1 1027 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 PCNX4Q63HM2 1172 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 MCTP1Q6DN14 999 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 USP17L6PQ6QN14 398 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 MAMDC4Q6UXC1 1216 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 PIK3AP1Q6ZUJ8 805 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 FERMT3Q86UX7 667 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 ANKRD13CQ8N6S4 541 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 KCNG4Q8TDN1 519 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 TBCKQ8TEA7 893 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 SOCS4Q8WXH5 440 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 USP6NLQ92738 828 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 PDCD2LQ9BRP1 358 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 PXMP2Q9NR77 195 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 COL20A1Q9P218 1284 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 ADD3Q9UEY8 706 aaKnown RBP8.53□□□□□ -1.04
GINS3-205ENST00000564814 CEP131Q9UPN4 1083 aa8.53□□□□□ -1.04
GINS3-205ENST00000564814 IGLV3-22A0A075B6J6 115 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 B4DLN1 442 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 PTMSP20962 102 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 PTPREP23469 700 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 SETQ01105 290 aaPredicted RBP8.52□□□□□ -1.05
GINS3-205ENST00000564814 DNM1Q05193 864 aaKnown RBP8.52□□□□□ -1.05
GINS3-205ENST00000564814 KCTD2Q14681 263 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 UBE2SQ16763 222 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 ZNF792Q3KQV3 632 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 HABP4Q5JVS0 413 aaKnown RBP8.52□□□□□ -1.05
GINS3-205ENST00000564814 TTC38Q5R3I4 469 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 MORN1Q5T089 497 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 JAKMIP3Q5VZ66 844 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 ANO1Q5XXA6 986 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 SLC30A10Q6XR72 485 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 GPR142Q7Z601 462 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 VSIG10LQ86VR7 867 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 C4orf32Q8N8J7 132 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 RASGRP4Q8TDF6 673 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 NSUN6Q8TEA1 469 aaKnown RBP8.52□□□□□ -1.05
GINS3-205ENST00000564814 TBC1D5Q92609 795 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 LENG9Q96B70 501 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 INPP4AQ96PE3 977 aaPredicted RBP8.52□□□□□ -1.05
GINS3-205ENST00000564814 USP28Q96RU2 1077 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 PAGR1Q9BTK6 254 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 PORCNQ9H237 461 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 KCNMB3Q9NPA1 279 aa8.52□□□□□ -1.05
GINS3-205ENST00000564814 BIN2Q9UBW5 565 aaPredicted RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms