RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 PBX2P40425 430 aa21.59■■□□□ 1.05
CLN6-204ENST00000564752 PPP2R5BQ15173 497 aa21.59■■□□□ 1.05
CLN6-204ENST00000564752 BRDTQ58F21 947 aaPredicted RBP21.59■■□□□ 1.05
CLN6-204ENST00000564752 MTG1Q9BT17 334 aaPredicted RBP21.59■■□□□ 1.05
CLN6-204ENST00000564752 WNT8AQ9H1J5 351 aa21.59■■□□□ 1.05
CLN6-204ENST00000564752 GPHNQ9NQX3 736 aaPredicted RBP21.59■■□□□ 1.05
CLN6-204ENST00000564752 CXXC1Q9P0U4 656 aaPredicted RBP21.59■■□□□ 1.05
CLN6-204ENST00000564752 TNKSO95271 1327 aa21.58■■□□□ 1.05
CLN6-204ENST00000564752 ABCB11O95342 1321 aa21.58■■□□□ 1.05
CLN6-204ENST00000564752 A6NJR5 290 aa21.58■■□□□ 1.05
CLN6-204ENST00000564752 SUPT20HL2P0C7V6 817 aa21.58■■□□□ 1.05
CLN6-204ENST00000564752 TXNP10599 105 aaKnown RBP21.58■■□□□ 1.05
CLN6-204ENST00000564752 CENPQQ7L2Z9 268 aaPredicted RBP21.58■■□□□ 1.05
CLN6-204ENST00000564752 COPS5Q92905 334 aa21.58■■□□□ 1.05
CLN6-204ENST00000564752 CNNM2Q9H8M5 875 aa21.58■■□□□ 1.05
CLN6-204ENST00000564752 TRMT13Q9NUP7 481 aaKnown RBP21.58■■□□□ 1.05
CLN6-204ENST00000564752 KPNA6O60684 536 aa21.57■■□□□ 1.04
CLN6-204ENST00000564752 PARP1P09874 1014 aaKnown RBP21.57■■□□□ 1.04
CLN6-204ENST00000564752 TTLL4Q14679 1199 aa21.57■■□□□ 1.04
CLN6-204ENST00000564752 QRICH1Q2TAL8 776 aa21.57■■□□□ 1.04
CLN6-204ENST00000564752 MCF2L2Q86YR7 1114 aa21.57■■□□□ 1.04
CLN6-204ENST00000564752 RPUSD2Q8IZ73 545 aaKnown RBP21.57■■□□□ 1.04
CLN6-204ENST00000564752 SYTL5Q8TDW5 730 aaPredicted RBP21.57■■□□□ 1.04
CLN6-204ENST00000564752 VWCEQ96DN2 955 aa21.57■■□□□ 1.04
CLN6-204ENST00000564752 TAAR1Q96RJ0 339 aa21.57■■□□□ 1.04
CLN6-204ENST00000564752 MTIF3Q9H2K0 278 aaKnown RBP21.57■■□□□ 1.04
CLN6-204ENST00000564752 JMJD4Q9H9V9 463 aa21.57■■□□□ 1.04
CLN6-204ENST00000564752 ARIH2O95376 493 aa21.56■■□□□ 1.04
CLN6-204ENST00000564752 NBPF20Q3BBV1 942 aa21.56■■□□□ 1.04
CLN6-204ENST00000564752 CCDC62Q6P9F0 684 aa21.56■■□□□ 1.04
CLN6-204ENST00000564752 OTOP2Q7RTS6 562 aa21.56■■□□□ 1.04
CLN6-204ENST00000564752 NSUN6Q8TEA1 469 aaKnown RBP21.56■■□□□ 1.04
CLN6-204ENST00000564752 UBAC1Q9BSL1 405 aa21.56■■□□□ 1.04
CLN6-204ENST00000564752 VAT1LQ9HCJ6 419 aa21.56■■□□□ 1.04
CLN6-204ENST00000564752 COL20A1Q9P218 1284 aa21.56■■□□□ 1.04
CLN6-204ENST00000564752 MRPL11Q9Y3B7 192 aaKnown RBP21.56■■□□□ 1.04
CLN6-204ENST00000564752 SGSM2O43147 1006 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 CYP2C9P11712 490 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 IFIT1BQ5T764 474 aaKnown RBP21.55■■□□□ 1.04
CLN6-204ENST00000564752 NFRKBQ6P4R8 1299 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 FBXO11Q86XK2 927 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 SCLYQ96I15 445 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 IWS1Q96ST2 819 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 MSRAQ9UJ68 235 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 CHD9Q3L8U1 2897 aa21.55■■□□□ 1.04
CLN6-204ENST00000564752 DHX16O60231 1041 aaKnown RBP21.54■■□□□ 1.04
CLN6-204ENST00000564752 PTH1RQ03431 593 aa21.54■■□□□ 1.04
CLN6-204ENST00000564752 SEC23AQ15436 765 aa21.54■■□□□ 1.04
CLN6-204ENST00000564752 RAB30Q15771 203 aa21.54■■□□□ 1.04
CLN6-204ENST00000564752 STAG2Q8N3U4 1231 aa21.54■■□□□ 1.04
CLN6-204ENST00000564752 U3KPZ7 1027 aaPredicted RBP21.54■■□□□ 1.04
CLN6-204ENST00000564752 SPTBN5Q9NRC6 3674 aaKnown RBP21.53■■□□□ 1.04
CLN6-204ENST00000564752 PTPN11Q06124 597 aaPredicted RBP21.53■■□□□ 1.04
CLN6-204ENST00000564752 TRDNQ13061 729 aa21.53■■□□□ 1.04
CLN6-204ENST00000564752 STXBP2Q15833 593 aa21.53■■□□□ 1.04
CLN6-204ENST00000564752 SEPT14Q6ZU15 432 aa21.53■■□□□ 1.04
CLN6-204ENST00000564752 CYB5R4Q7L1T6 521 aa21.53■■□□□ 1.04
CLN6-204ENST00000564752 RMDN3Q96TC7 470 aa21.53■■□□□ 1.04
CLN6-204ENST00000564752 LY6KQ17RY6 165 aa21.52■■□□□ 1.04
CLN6-204ENST00000564752 FAM47CQ5HY64 1035 aa21.52■■□□□ 1.04
CLN6-204ENST00000564752 MTMR8Q96EF0 704 aa21.52■■□□□ 1.04
CLN6-204ENST00000564752 AMNQ9BXJ7 453 aa21.52■■□□□ 1.04
CLN6-204ENST00000564752 SLC4A7Q9Y6M7 1214 aa21.52■■□□□ 1.04
CLN6-204ENST00000564752 KLRF2D3W0D1 207 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 GH1P01241 217 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 PFKMP08237 780 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 CYP21A2P08686 494 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 ARHGEF16Q5VV41 709 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 PPP1R13LQ8WUF5 828 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 AFG1LQ8WV93 481 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 NKX2-4Q9H2Z4 354 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 PRDM12Q9H4Q4 367 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 MAD2L2Q9UI95 211 aa21.51■■□□□ 1.03
CLN6-204ENST00000564752 YBX2Q9Y2T7 364 aaKnown RBP21.51■■□□□ 1.03
CLN6-204ENST00000564752 PALM3A6NDB9 673 aaPredicted RBP21.5■■□□□ 1.03
CLN6-204ENST00000564752 OPLAHO14841 1288 aa21.5■■□□□ 1.03
CLN6-204ENST00000564752 EIF3JO75822 258 aaKnown RBP21.5■■□□□ 1.03
CLN6-204ENST00000564752 HSD17B4P51659 736 aa21.5■■□□□ 1.03
CLN6-204ENST00000564752 GHRHRQ02643 423 aa21.5■■□□□ 1.03
CLN6-204ENST00000564752 ARHGAP1Q07960 439 aa21.5■■□□□ 1.03
CLN6-204ENST00000564752 RALYLQ86SE5 291 aaKnown RBP21.5■■□□□ 1.03
CLN6-204ENST00000564752 USP38Q8NB14 1042 aa21.5■■□□□ 1.03
CLN6-204ENST00000564752 GAS2L1Q99501 681 aaPredicted RBP21.5■■□□□ 1.03
CLN6-204ENST00000564752 SCN10AQ9Y5Y9 1956 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 PITPNM1O00562 1244 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 ZBTB5O15062 677 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 CFBP00751 764 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 NR3C2P08235 984 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 MMP3P08254 477 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 EIF2AK2P19525 551 aaKnown RBP21.49■■□□□ 1.03
CLN6-204ENST00000564752 DEFB128Q7Z7B8 93 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 SLC28A3Q9HAS3 691 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 PXMP2Q9NR77 195 aa21.49■■□□□ 1.03
CLN6-204ENST00000564752 MAP3K20Q9NYL2 800 aaKnown RBP21.49■■□□□ 1.03
CLN6-204ENST00000564752 DDX41Q9UJV9 622 aaKnown RBP21.49■■□□□ 1.03
CLN6-204ENST00000564752 ZBBXA8MT70 800 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 PPP1R11O60927 126 aaPredicted RBP21.48■■□□□ 1.03
CLN6-204ENST00000564752 IQCF3P0C7M6 154 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 RFC2P35250 354 aa21.48■■□□□ 1.03
CLN6-204ENST00000564752 RABGGTBP53611 331 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms