RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 XBP1P17861 261 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 EIF2AK2P19525 551 aaKnown RBP18.36■□□□□ 0.53
RAB40C-208ENST00000564703 MCM2P49736 904 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 ADCY7P51828 1080 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 STXBP2Q15833 593 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 USP17L6PQ6QN14 398 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 EEPD1Q7L9B9 569 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 TEX2Q8IWB9 1127 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 TRPV1Q8NER1 839 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 WASF1Q92558 559 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 C6orf50Q9HD87 102 aa18.36■□□□□ 0.53
RAB40C-208ENST00000564703 POTEFA5A3E0 1075 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 SPDYE3A6NKU9 549 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 STXBP3O00186 592 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 NR3C2P08235 984 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 ZNF865P0CJ78 1059 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-208ENST00000564703 RARBP10826 455 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 EN2P19622 333 aaPredicted RBP18.35■□□□□ 0.53
RAB40C-208ENST00000564703 GNA11P29992 359 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 PKN1Q16512 942 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 CCDC148Q8NFR7 591 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 MORC4Q8TE76 937 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 GTF3C6Q969F1 213 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 EHMT1Q9H9B1 1298 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 VTA1Q9NP79 307 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 RIC8AQ9NPQ8 531 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 SH3GLB2Q9NR46 395 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 PXMP2Q9NR77 195 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 COL20A1Q9P218 1284 aa18.35■□□□□ 0.53
RAB40C-208ENST00000564703 ASTN1O14525 1302 aa18.34■□□□□ 0.53
RAB40C-208ENST00000564703 MEIS2O14770 477 aa18.34■□□□□ 0.53
RAB40C-208ENST00000564703 FOSP01100 380 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-208ENST00000564703 MYCLP12524 364 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-208ENST00000564703 NLRP5P59047 1200 aa18.34■□□□□ 0.53
RAB40C-208ENST00000564703 CCDC144BQ3MJ40 725 aa18.34■□□□□ 0.53
RAB40C-208ENST00000564703 IQSEC1Q6DN90 963 aa18.34■□□□□ 0.53
RAB40C-208ENST00000564703 BICD2Q8TD16 824 aa18.34■□□□□ 0.53
RAB40C-208ENST00000564703 ORC3Q9UBD5 711 aaPredicted RBP18.34■□□□□ 0.53
RAB40C-208ENST00000564703 EIF3JO75822 258 aaKnown RBP18.33■□□□□ 0.52
RAB40C-208ENST00000564703 LARGE1O95461 756 aa18.33■□□□□ 0.52
RAB40C-208ENST00000564703 TNFAIP2Q03169 654 aa18.33■□□□□ 0.52
RAB40C-208ENST00000564703 MCTP2Q6DN12 878 aa18.33■□□□□ 0.52
RAB40C-208ENST00000564703 ARRDC4Q8NCT1 418 aa18.33■□□□□ 0.52
RAB40C-208ENST00000564703 PDCD2LQ9BRP1 358 aa18.33■□□□□ 0.52
RAB40C-208ENST00000564703 SPC25Q9HBM1 224 aa18.33■□□□□ 0.52
RAB40C-208ENST00000564703 MCM3APO60318 1980 aa18.33■□□□□ 0.52
RAB40C-208ENST00000564703 ESYT2A0FGR8 921 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 MYCNP04198 464 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-208ENST00000564703 EDNRBP24530 442 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 CCND2P30279 289 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 UBE2SQ16763 222 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 ANO1Q5XXA6 986 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 LHX8Q68G74 356 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 CCDC83Q8IWF9 413 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 FBXO16Q8IX29 292 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-208ENST00000564703 FAM177A1Q8N128 213 aaPredicted RBP18.32■□□□□ 0.52
RAB40C-208ENST00000564703 CRISPLD2Q9H0B8 497 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 ZMYND12Q9H0C1 365 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
RAB40C-208ENST00000564703 DDX49Q9Y6V7 483 aaKnown RBP18.32■□□□□ 0.52
RAB40C-208ENST00000564703 STK36Q9NRP7 1315 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 PGM5Q15124 567 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 IFFO2Q5TF58 517 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 TYW1BQ6NUM6 668 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 XRRA1Q6P2D8 792 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 SEPT14Q6ZU15 432 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 VSIG10LQ86VR7 867 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 LLPHQ9BRT6 129 aaKnown RBP18.31■□□□□ 0.52
RAB40C-208ENST00000564703 AP5M1Q9H0R1 490 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 XPNPEP3Q9NQH7 507 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 PDGFCQ9NRA1 345 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 VPS54Q9P1Q0 977 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 OGDHLQ9ULD0 1010 aa18.31■□□□□ 0.52
RAB40C-208ENST00000564703 DUSP11O75319 330 aaKnown RBP18.3■□□□□ 0.52
RAB40C-208ENST00000564703 STAM2O75886 525 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 CTDNEP1O95476 244 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 ADCYAP1R1P41586 468 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 TRIM29Q14134 588 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 GALNT17Q6IS24 598 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 TAPT1Q6NXT6 567 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 ANKLE1Q8NAG6 615 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 SCFD2Q8WU76 684 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 WDR11Q9BZH6 1224 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 KATNBL1Q9H079 304 aa18.3■□□□□ 0.52
RAB40C-208ENST00000564703 RBBP6Q7Z6E9 1792 aaKnown RBP18.3■□□□□ 0.52
RAB40C-208ENST00000564703 TXNP10599 105 aaKnown RBP18.29■□□□□ 0.52
RAB40C-208ENST00000564703 AP3B2Q13367 1082 aa18.29■□□□□ 0.52
RAB40C-208ENST00000564703 TTLL4Q14679 1199 aa18.29■□□□□ 0.52
RAB40C-208ENST00000564703 JAKMIP3Q5VZ66 844 aa18.29■□□□□ 0.52
RAB40C-208ENST00000564703 KCNV1Q6PIU1 500 aa18.29■□□□□ 0.52
RAB40C-208ENST00000564703 RNF180Q86T96 592 aa18.29■□□□□ 0.52
RAB40C-208ENST00000564703 REXO1Q8N1G1 1221 aaKnown RBP18.29■□□□□ 0.52
RAB40C-208ENST00000564703 NSUN7Q8NE18 718 aaKnown RBP18.29■□□□□ 0.52
RAB40C-208ENST00000564703 ALG1Q9BT22 464 aa18.29■□□□□ 0.52
RAB40C-208ENST00000564703 RBM47A0AV96 593 aaKnown RBP18.28■□□□□ 0.52
RAB40C-208ENST00000564703 KBTBD13C9JR72 458 aa18.28■□□□□ 0.52
RAB40C-208ENST00000564703 NKRFO15226 690 aaKnown RBP eCLIP18.28■□□□□ 0.52
RAB40C-208ENST00000564703 DYNC1LI2O43237 492 aaPredicted RBP18.28■□□□□ 0.52
RAB40C-208ENST00000564703 FARP2O94887 1054 aaPredicted RBP18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms