RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 LRFN4Q6PJG9 635 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 ZNF771Q7L3S4 317 aaPredicted RBP5.54□□□□□ -1.52
CAPN3-212ENST00000564503 MCM10Q7L590 875 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 G2E3Q7L622 706 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 SPC24Q8NBT2 197 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 ZNF507Q8TCN5 953 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 RUFY2Q8WXA3 655 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 ELMO3Q96BJ8 720 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 HRASLS5Q96KN8 279 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 TM6SF1Q9BZW5 370 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 LSG1Q9H089 658 aaKnown RBP5.54□□□□□ -1.52
CAPN3-212ENST00000564503 DDX19AQ9NUU7 478 aaKnown RBP5.54□□□□□ -1.52
CAPN3-212ENST00000564503 CTNNA3Q9UI47 895 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 TSPYL4Q9UJ04 414 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 TTF2Q9UNY4 1162 aaKnown RBP5.54□□□□□ -1.52
CAPN3-212ENST00000564503 MTMR6Q9Y217 621 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 LAMB4A4D0S4 1761 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 SCN11AQ9UI33 1791 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 MAP3K5Q99683 1374 aa5.54□□□□□ -1.52
CAPN3-212ENST00000564503 SPEF2Q9C093 1822 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 TTC21AQ8NDW8 1320 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 USP42Q9H9J4 1324 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 PHRF1Q9P1Y6 1649 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 ARFGEF2Q9Y6D5 1785 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 PNMA6EA0A0J9YXQ4 647 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 CCDC66A2RUB6 948 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 F6X3S4 739 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 IGF2BP3O00425 579 aaKnown RBP eCLIP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 AP5Z1O43299 807 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 HTATSF1O43719 755 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 NEMFO60524 1076 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 CAVIN2O95810 425 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 TNNT1P13805 278 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 ITIH2P19823 946 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 PTGS1P23219 599 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 EIF4BP23588 611 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 GNA15P30679 374 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 CCDC30Q5VVM6 783 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 RUFY3Q7L099 469 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 CYFIP1Q7L576 1253 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 CCDC186Q7Z3E2 898 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 PLA2G4DQ86XP0 818 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 CREBRFQ8IUR6 639 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 UNC5CLQ8IV45 518 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 DRC7Q8IY82 874 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 KCT2Q8NC54 265 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 TDRD7Q8NHU6 1098 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 SSH3Q8TE77 659 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 TNKS2Q9H2K2 1166 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 TNMDQ9H2S6 317 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 MBNL3Q9NUK0 354 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 RNF19AQ9NV58 838 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 GTF2IRD1Q9UHL9 959 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 DDX41Q9UJV9 622 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 SNX11Q9Y5W9 270 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 LRRFIP2Q9Y608 721 aaKnown RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 MRVI1Q9Y6F6 885 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 AK5Q9Y6K8 562 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 MORC2Q9Y6X9 1032 aaPredicted RBP5.53□□□□□ -1.52
CAPN3-212ENST00000564503 DIP2BQ9P265 1576 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 KDRP35968 1356 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 USP31Q70CQ4 1352 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 C5P01031 1676 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 KIF1AQ12756 1690 aa5.53□□□□□ -1.52
CAPN3-212ENST00000564503 RGPD5Q99666 1765 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 TTC41PQ6P2S7 1318 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 VPS37CA5D8V6 355 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 PAPLNO95428 1278 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 EOMESO95936 686 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 RNASE1P07998 156 aaKnown RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 UBTFL1P0CB47 393 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 YBX3P16989 372 aaKnown RBP eCLIP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 CASTP20810 708 aaKnown RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 PDCP20941 246 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 ZNF75DP51815 510 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 TPD52L1Q16890 204 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 ANO6Q4KMQ2 910 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 HSP90AB4PQ58FF6 505 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 TTBK2Q6IQ55 1244 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 RBM43Q6ZSC3 357 aaKnown RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 ARMCX6Q7L4S7 300 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 HDXQ7Z353 690 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 WAPLQ7Z5K2 1190 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 TTC6Q86TZ1 520 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 CCDC83Q8IWF9 413 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 CCDC112Q8NEF3 446 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 ZNF397Q8NF99 534 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 PI4K2BQ8TCG2 481 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 KIF1BPQ96EK5 621 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 PLPPR2Q96GM1 343 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 SCAND2PQ9GZW5 306 aaPredicted RBP5.52□□□□□ -1.53
CAPN3-212ENST00000564503 PDRG1Q9NUG6 133 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 BABAM1Q9NWV8 329 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 HYPKQ9NX55 129 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 ADAMTS6Q9UKP5 1117 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 CYP46A1Q9Y6A2 500 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 SLIT1O75093 1534 aa5.52□□□□□ -1.53
CAPN3-212ENST00000564503 NPHP3Q7Z494 1330 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 NWD1Q149M9 1564 aa5.51□□□□□ -1.53
CAPN3-212ENST00000564503 USP6P35125 1406 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms