RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 CRYMQ14894 314 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 DLGAP5Q15398 846 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 GPR162Q16538 588 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 C12orf60Q5U649 245 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 CDKAL1Q5VV42 579 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 CYB5R4Q7L1T6 521 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 FMNL3Q8IVF7 1028 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 CCDC50Q8IVM0 306 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 ACRBPQ8NEB7 543 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 SPATA20Q8TB22 786 aa12.32□□□□□ -0.44
TCF4-222ENST00000564228 RIN2Q8WYP3 895 aaPredicted RBP12.32□□□□□ -0.44
TCF4-222ENST00000564228 SAMSN1Q9NSI8 373 aaKnown RBP12.32□□□□□ -0.44
TCF4-222ENST00000564228 GOLGA8BA8MQT2 603 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 CPLX1O14810 134 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 TEX33O43247 280 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 TFRCP02786 760 aaKnown RBP12.31□□□□□ -0.44
TCF4-222ENST00000564228 GYPCP04921 128 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 ANTXR2P58335 489 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 TCP10Q12799 353 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 C11orf91Q3C1V1 193 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 ALS2CLQ60I27 953 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 CCDC70Q6NSX1 233 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 EGFL6Q8IUX8 553 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 KRI1Q8N9T8 703 aaKnown RBP12.31□□□□□ -0.44
TCF4-222ENST00000564228 EHBP1Q8NDI1 1231 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 DYNLL2Q96FJ2 89 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 MED15Q96RN5 788 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 HAUS4Q9H6D7 363 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 VCPKMTQ9H867 229 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 RNF181Q9P0P0 153 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 SAR1BQ9Y6B6 198 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 NDUFAB1O14561 156 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
TCF4-222ENST00000564228 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 CASP14P31944 242 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 GMPSP49915 693 aaPredicted RBP12.31□□□□□ -0.44
TCF4-222ENST00000564228 IRX1P78414 480 aaPredicted RBP12.31□□□□□ -0.44
TCF4-222ENST00000564228 EMC10Q5UCC4 262 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 TRMT44Q8IYL2 757 aaKnown RBP12.31□□□□□ -0.44
TCF4-222ENST00000564228 ZKSCAN3Q9BRR0 538 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
TCF4-222ENST00000564228 ZSWIM5Q9P217 1185 aa12.31□□□□□ -0.44
TCF4-222ENST00000564228 SYNRGQ9UMZ2 1314 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 KLF18A0A0U1RQI7 1052 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 CLRN2A0PK11 232 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 MYO1FO00160 1098 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 RASSF9O75901 435 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 CDKL5O76039 1030 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 RPS12P25398 132 aaKnown RBP12.3□□□□□ -0.44
TCF4-222ENST00000564228 ERVK-24P63145 666 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 ITIH3Q06033 890 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 ACTN3Q08043 901 aaPredicted RBP12.3□□□□□ -0.44
TCF4-222ENST00000564228 HSP90AA4PQ58FG1 418 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 RBM26Q5T8P6 1007 aaKnown RBP12.3□□□□□ -0.44
TCF4-222ENST00000564228 ESR2Q92731 530 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 N4BP2L2Q92802 583 aaPredicted RBP12.3□□□□□ -0.44
TCF4-222ENST00000564228 FAXDC2Q96IV6 333 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 KLC4Q9NSK0 619 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 ABHD10Q9NUJ1 306 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 KCNG1Q9UIX4 513 aa12.3□□□□□ -0.44
TCF4-222ENST00000564228 ANO9A1A5B4 782 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 PPFIA3O75145 1194 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 SCP2P22307 547 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 NBPF20Q3BBV1 942 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 IQCA1Q86XH1 822 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 MICALL2Q8IY33 904 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 ZNF579Q8NAF0 562 aaKnown RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 SLC44A5Q8NCS7 719 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 MMS19Q96T76 1030 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 ACTR5Q9H9F9 607 aaPredicted RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 MYOZ2Q9NPC6 264 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 TMOD2Q9NZR1 351 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 ODF2LQ9ULJ1 636 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 SIPA1L1O43166 1804 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 ROBO3Q96MS0 1386 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 IFIT3O14879 490 aaKnown RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 FOXN1O15353 648 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 PCP11498 1178 aaKnown RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 FXR1P51114 621 aaKnown RBP eCLIP12.29□□□□□ -0.44
TCF4-222ENST00000564228 NAP1L1P55209 391 aaKnown RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 APBA1Q02410 837 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 SKIDA1Q1XH10 827 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 KRT40Q6A162 431 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 ZNF572Q7Z3I7 529 aaPredicted RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 ZSCAN29Q8IWY8 852 aaPredicted RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 ZFPM1Q8IX07 1006 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 ALG1Q9BT22 464 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 IDI2Q9BXS1 227 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 MKNK2Q9HBH9 465 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 FAM198AQ9UFP1 575 aa12.29□□□□□ -0.44
TCF4-222ENST00000564228 CNOT7Q9UIV1 285 aaKnown RBP12.29□□□□□ -0.44
TCF4-222ENST00000564228 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.29□□□□□ -0.44
TCF4-222ENST00000564228 TCP10L2B9ZVM9 353 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 GTPBP6O43824 516 aaPredicted RBP12.28□□□□□ -0.44
TCF4-222ENST00000564228 FGRP09769 529 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 TNFRSF8P28908 595 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 NNTQ13423 1086 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 CUL4BQ13620 913 aa12.28□□□□□ -0.44
TCF4-222ENST00000564228 NBPF9Q3BBW0 867 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms