RNA–Protein interactions for RNA: ENST00000564068.1

COMMD4-209, Transcript of COMM domain containing 4, humanhuman

Gene COMMD4, Length 4,204 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-209ENST00000564068 NLRP14Q86W24 1093 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 NLRP3Q96P20 1036 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 ACTR5Q9H9F9 607 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-209ENST00000564068 PLCB1Q9NQ66 1216 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 PLCG1P19174 1290 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 SESN3P58005 492 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 DYNLL1P63167 89 aaKnown RBP13.84□□□□□ -0.19
COMMD4-209ENST00000564068 FOXP4Q8IVH2 680 aaPredicted RBP13.84□□□□□ -0.19
COMMD4-209ENST00000564068 WHAMMQ8TF30 809 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 IQCGQ9H095 443 aaKnown RBP13.84□□□□□ -0.19
COMMD4-209ENST00000564068 KLHL14Q9P2G3 628 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 HPS5Q9UPZ3 1129 aa13.84□□□□□ -0.19
COMMD4-209ENST00000564068 AFF2P51816 1311 aa13.83□□□□□ -0.19
COMMD4-209ENST00000564068 EIF4E1BA6NMX2 242 aaKnown RBP13.83□□□□□ -0.19
COMMD4-209ENST00000564068 TRAPPC10P48553 1259 aa13.83□□□□□ -0.19
COMMD4-209ENST00000564068 ADAM9Q13443 819 aa13.83□□□□□ -0.19
COMMD4-209ENST00000564068 FAM26FQ5R3K3 315 aa13.83□□□□□ -0.19
COMMD4-209ENST00000564068 UBL4BQ8N7F7 174 aa13.83□□□□□ -0.19
COMMD4-209ENST00000564068 STMN2Q93045 179 aa13.83□□□□□ -0.19
COMMD4-209ENST00000564068 DISC1Q9NRI5 854 aa13.83□□□□□ -0.19
COMMD4-209ENST00000564068 ARMCX3Q9UH62 379 aaPredicted RBP13.83□□□□□ -0.19
COMMD4-209ENST00000564068 PALMO75781 387 aa13.83□□□□□ -0.2
COMMD4-209ENST00000564068 STAT1P42224 750 aa13.83□□□□□ -0.2
COMMD4-209ENST00000564068 GFPT1Q06210 699 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-209ENST00000564068 CCDC174Q6PII3 467 aa13.83□□□□□ -0.2
COMMD4-209ENST00000564068 CCDC24Q8N4L8 307 aa13.83□□□□□ -0.2
COMMD4-209ENST00000564068 RNF10Q8N5U6 811 aaKnown RBP13.83□□□□□ -0.2
COMMD4-209ENST00000564068 ELAC2Q9BQ52 826 aaKnown RBP13.83□□□□□ -0.2
COMMD4-209ENST00000564068 ATP5DP30049 168 aa13.83□□□□□ -0.2
COMMD4-209ENST00000564068 MRPL12P52815 198 aaKnown RBP13.83□□□□□ -0.2
COMMD4-209ENST00000564068 CACNB1Q02641 598 aaPredicted RBP13.83□□□□□ -0.2
COMMD4-209ENST00000564068 TSNAXIP1Q2TAA8 658 aa13.83□□□□□ -0.2
COMMD4-209ENST00000564068 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.83□□□□□ -0.2
COMMD4-209ENST00000564068 ADGRB1O14514 1584 aa13.83□□□□□ -0.2
COMMD4-209ENST00000564068 KLRF2D3W0D1 207 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 PPP1R37O75864 691 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 XRCC5P13010 732 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 AP1ARQ63HQ0 302 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 NEK8Q86SG6 692 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 PPP1R14CQ8TAE6 165 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 ZNF219Q9P2Y4 722 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 UAP1Q16222 522 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 MS4A14Q96JA4 679 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 SPATS2LQ9NUQ6 558 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 RNF14Q9UBS8 474 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 TARSL2A2RTX5 802 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 GMNCA6NCL1 334 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 PGRMC1O00264 195 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 PRPF3O43395 683 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 ZNF365Q70YC5 407 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 ILDR1Q86SU0 546 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 MSANTD4Q8NCY6 345 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 CCT8L2Q96SF2 557 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 TRIM6Q9C030 488 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 LRRC53A6NM62 1247 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 KRT15P19012 456 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 HIBADHP31937 336 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 MAGOHP61326 146 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 ERVK-24P63145 666 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 GSTO1P78417 241 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 MYO1EQ12965 1108 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 RASGRF1Q13972 1273 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 MAPKAPK5Q8IW41 473 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 MAGOHBQ96A72 148 aaKnown RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 ASAP1Q9ULH1 1129 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 SUFUQ9UMX1 484 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 SNX12Q9UMY4 172 aa13.82□□□□□ -0.2
COMMD4-209ENST00000564068 COL3A1P02461 1466 aaPredicted RBP13.82□□□□□ -0.2
COMMD4-209ENST00000564068 SPDYE3A6NKU9 549 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 ATP2A1O14983 1001 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 PTPAQ15257 358 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 RPGRQ92834 1020 aaKnown RBP13.81□□□□□ -0.2
COMMD4-209ENST00000564068 FRMD4BQ9Y2L6 1034 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 DAAM1Q9Y4D1 1078 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 CPS1P31327 1500 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 A0A0U1RQJ8 604 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 GCNT3O95395 438 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 CROCCP2Q86T23 111 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 GPBP1Q86WP2 473 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 STAG1Q8WVM7 1258 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 MCUR1Q96AQ8 359 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 ATG3Q9NT62 314 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 PANK4Q9NVE7 773 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 PTPN22Q9Y2R2 807 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 DUSP10Q9Y6W6 482 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 CHMP2AO43633 222 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 TMC4Q7Z404 712 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 EHD2Q9NZN4 543 aa13.81□□□□□ -0.2
COMMD4-209ENST00000564068 BAG6P46379 1132 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 FKBP3Q00688 224 aaKnown RBP13.8□□□□□ -0.2
COMMD4-209ENST00000564068 MAEAQ7L5Y9 396 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 PROCA1Q8NCQ7 364 aaPredicted RBP13.8□□□□□ -0.2
COMMD4-209ENST00000564068 TTLL11Q8NHH1 800 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 TGFBRAP1Q8WUH2 860 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 SMC6Q96SB8 1091 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 SETDB2Q96T68 719 aa13.8□□□□□ -0.2
COMMD4-209ENST00000564068 SEC31BQ9NQW1 1179 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms