RNA–Protein interactions for RNA: ENST00000563683.5

RNF40-204, Transcript of ring finger protein 40, humanhuman

TSL 5 BASIC

Gene RNF40, Length 4,063 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-204ENST00000563683 STXBP4Q6ZWJ1 553 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 GPBP1Q86WP2 473 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 FAM217BQ9NTX9 383 aaPredicted RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 ADD3Q9UEY8 706 aaKnown RBP11.55□□□□□ -0.56
RNF40-204ENST00000563683 DNM3Q9UQ16 869 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 FAM169AQ9Y6X4 670 aa11.55□□□□□ -0.56
RNF40-204ENST00000563683 USP17L5A8MUK1 530 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 CLGNO14967 610 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 CCT5P48643 541 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 CACNB3P54284 484 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 SPICE1Q8N0Z3 855 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 CEP95Q96GE4 821 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 EHMT1Q9H9B1 1298 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 DBNDD1Q9H9R9 158 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 PCDHB13Q9Y5F0 798 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 DDX39AO00148 427 aaKnown RBP11.54□□□□□ -0.56
RNF40-204ENST00000563683 TRIM37O94972 964 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 FECHP22830 423 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 LIG3P49916 1009 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 GSCP56915 257 aaPredicted RBP11.54□□□□□ -0.56
RNF40-204ENST00000563683 NFIXQ14938 502 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 TXNRD1Q16881 649 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 HAUS3Q68CZ6 603 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 TSGA10Q9BZW7 698 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 NFAT5O94916 1531 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 NDUFA10O95299 355 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 EEF1GP26641 437 aaKnown RBP11.54□□□□□ -0.56
RNF40-204ENST00000563683 VAV2P52735 878 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 KLHL30Q0D2K2 578 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 B4GALNT4Q76KP1 1039 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 SPATS2Q86XZ4 545 aaKnown RBP11.54□□□□□ -0.56
RNF40-204ENST00000563683 DHX37Q8IY37 1157 aaKnown RBP11.54□□□□□ -0.56
RNF40-204ENST00000563683 RDH13Q8NBN7 331 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 NBPF3Q9H094 633 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 CXorf56Q9H5V9 222 aa11.54□□□□□ -0.56
RNF40-204ENST00000563683 GOLGA6BA6NDN3 693 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 PBX1P40424 430 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 CERKLQ49MI3 558 aaPredicted RBP11.53□□□□□ -0.56
RNF40-204ENST00000563683 FAM26FQ5R3K3 315 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 C12orf60Q5U649 245 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 C3orf67Q6ZVT6 689 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 TXNRD3Q86VQ6 643 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 VGLL2Q8N8G2 317 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 TACO1Q9BSH4 297 aaKnown RBP11.53□□□□□ -0.56
RNF40-204ENST00000563683 CAPS2Q9BXY5 557 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 PANK4Q9NVE7 773 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 TMEM260Q9NX78 707 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 POTEMA6NI47 508 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 FAM196BA6NMK8 535 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 ACTN4O43707 911 aaKnown RBP11.53□□□□□ -0.56
RNF40-204ENST00000563683 ORC4O43929 436 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 OPA1O60313 960 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 GCNT3O95395 438 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 AMPD2Q01433 879 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 SP4Q02446 784 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 SMCR8Q8TEV9 937 aaPredicted RBP11.53□□□□□ -0.56
RNF40-204ENST00000563683 DHTKD1Q96HY7 919 aaPredicted RBP11.53□□□□□ -0.56
RNF40-204ENST00000563683 LMO7Q8WWI1 1683 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 GOLGA8KD6RF30 607 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 BBOX1O75936 387 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 CCDC172P0C7W6 258 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 CCNE1P24864 410 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 RPL13P26373 211 aaKnown RBP11.53□□□□□ -0.56
RNF40-204ENST00000563683 GGCXP38435 758 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 POLR2FP61218 127 aaKnown RBP11.53□□□□□ -0.56
RNF40-204ENST00000563683 SLFN13Q68D06 897 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 C8orf74Q6P047 294 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 BCAS4Q8TDM0 211 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 HPS3Q969F9 1004 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 AK8Q96MA6 479 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 NOX5Q96PH1 765 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 ABHD10Q9NUJ1 306 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 SPATA31A1Q5TZJ5 1347 aa11.53□□□□□ -0.56
RNF40-204ENST00000563683 LAD1O00515 517 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 KIF1CO43896 1103 aaKnown RBP11.52□□□□□ -0.56
RNF40-204ENST00000563683 ZEB2O60315 1214 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 IRAK1P51617 712 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 IFI16Q16666 785 aaKnown RBP11.52□□□□□ -0.56
RNF40-204ENST00000563683 CCDC174Q6PII3 467 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 TRAPPC11Q7Z392 1133 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 CLEC10AQ8IUN9 316 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 TPH2Q8IWU9 490 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 CPXCR1Q8N123 301 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 TBC1D5Q92609 795 aa11.52□□□□□ -0.56
RNF40-204ENST00000563683 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.52□□□□□ -0.561e-6■■■■■ 74.2
RNF40-204ENST00000563683 COL5A2P05997 1499 aaPredicted RBP11.52□□□□□ -0.57
RNF40-204ENST00000563683 PSMD14O00487 310 aa11.52□□□□□ -0.57
RNF40-204ENST00000563683 TTLL1O95922 423 aa11.52□□□□□ -0.57
RNF40-204ENST00000563683 KRT13P13646 458 aa11.52□□□□□ -0.57
RNF40-204ENST00000563683 HNRNPH1P31943 449 aaKnown RBP11.52□□□□□ -0.57
RNF40-204ENST00000563683 CXCR5P32302 372 aa11.52□□□□□ -0.57
RNF40-204ENST00000563683 EARS2Q5JPH6 523 aaKnown RBP11.52□□□□□ -0.57
RNF40-204ENST00000563683 SFMBT2Q5VUG0 894 aa11.52□□□□□ -0.57
RNF40-204ENST00000563683 SND1Q7KZF4 910 aaKnown RBP eCLIP11.52□□□□□ -0.57
RNF40-204ENST00000563683 MB21D1Q8N884 522 aa11.52□□□□□ -0.57
RNF40-204ENST00000563683 CTNNBL1Q8WYA6 563 aaPredicted RBP11.52□□□□□ -0.57
RNF40-204ENST00000563683 RIOK1Q9BRS2 568 aaKnown RBP11.52□□□□□ -0.57
RNF40-204ENST00000563683 SELENOOQ9BVL4 669 aa11.52□□□□□ -0.57
RNF40-204ENST00000563683 LSM14BQ9BX40 385 aaKnown RBP11.52□□□□□ -0.57
RNF40-204ENST00000563683 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms