RNA–Protein interactions for RNA: ENST00000563505.5

STUB1-202, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 894 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-202ENST00000563505 CYTH3O43739 400 aa28.12■■■□□ 2.09
STUB1-202ENST00000563505 TIMP1P01033 207 aa28.12■■■□□ 2.09
STUB1-202ENST00000563505 EPHB4P54760 987 aa28.12■■■□□ 2.09
STUB1-202ENST00000563505 NECTIN1Q15223 517 aa28.12■■■□□ 2.09
STUB1-202ENST00000563505 NSUN6Q8TEA1 469 aaKnown RBP28.12■■■□□ 2.09
STUB1-202ENST00000563505 SCFD2Q8WU76 684 aa28.12■■■□□ 2.09
STUB1-202ENST00000563505 MTA3Q9BTC8 594 aa28.12■■■□□ 2.09
STUB1-202ENST00000563505 CD4P01730 458 aa28.11■■■□□ 2.09
STUB1-202ENST00000563505 ITGA7Q13683 1181 aa28.11■■■□□ 2.09
STUB1-202ENST00000563505 COL9A3Q14050 684 aaPredicted RBP28.11■■■□□ 2.09
STUB1-202ENST00000563505 IWS1Q96ST2 819 aa28.11■■■□□ 2.09
STUB1-202ENST00000563505 RMDN3Q96TC7 470 aa28.11■■■□□ 2.09
STUB1-202ENST00000563505 LY9Q9HBG7 655 aa28.11■■■□□ 2.09
STUB1-202ENST00000563505 GPHNQ9NQX3 736 aaPredicted RBP28.11■■■□□ 2.09
STUB1-202ENST00000563505 NKRFO15226 690 aaKnown RBP eCLIP28.1■■■□□ 2.09
STUB1-202ENST00000563505 HSD17B4P51659 736 aa28.1■■■□□ 2.09
STUB1-202ENST00000563505 CREB3L3Q68CJ9 461 aa28.1■■■□□ 2.09
STUB1-202ENST00000563505 CCDC62Q6P9F0 684 aa28.1■■■□□ 2.09
STUB1-202ENST00000563505 CATIPQ7Z7H3 387 aa28.1■■■□□ 2.09
STUB1-202ENST00000563505 PIGSQ96S52 555 aa28.1■■■□□ 2.09
STUB1-202ENST00000563505 CDX2Q99626 313 aaPredicted RBP28.1■■■□□ 2.09
STUB1-202ENST00000563505 SEZ6LQ9BYH1 1024 aa28.1■■■□□ 2.09
STUB1-202ENST00000563505 PCDHA1Q9Y5I3 950 aa28.1■■■□□ 2.09
STUB1-202ENST00000563505 BAZ2BQ9UIF8 2168 aaKnown RBP28.1■■■□□ 2.09
STUB1-202ENST00000563505 ARIH2O95376 493 aa28.09■■■□□ 2.09
STUB1-202ENST00000563505 PPP2R5BQ15173 497 aa28.09■■■□□ 2.09
STUB1-202ENST00000563505 OR6J1Q8NGC5 347 aa28.09■■■□□ 2.09
STUB1-202ENST00000563505 COPS5Q92905 334 aa28.09■■■□□ 2.09
STUB1-202ENST00000563505 MAP3K14Q99558 947 aa28.09■■■□□ 2.09
STUB1-202ENST00000563505 A0A0C4DFX4 3053 aa28.09■■■□□ 2.09
STUB1-202ENST00000563505 TLR3O15455 904 aaKnown RBP28.08■■■□□ 2.09
STUB1-202ENST00000563505 PRC1O43663 620 aa28.08■■■□□ 2.09
STUB1-202ENST00000563505 CFBP00751 764 aa28.08■■■□□ 2.09
STUB1-202ENST00000563505 TXNP10599 105 aaKnown RBP28.08■■■□□ 2.09
STUB1-202ENST00000563505 CPT1AP50416 773 aa28.08■■■□□ 2.09
STUB1-202ENST00000563505 PSMC6P62333 389 aa28.08■■■□□ 2.09
STUB1-202ENST00000563505 MFSD5Q6N075 450 aa28.08■■■□□ 2.09
STUB1-202ENST00000563505 ANO2Q9NQ90 1003 aa28.08■■■□□ 2.09
STUB1-202ENST00000563505 POLR3EQ9NVU0 708 aa28.08■■■□□ 2.09
STUB1-202ENST00000563505 MAP3K20Q9NYL2 800 aaKnown RBP28.08■■■□□ 2.09
STUB1-202ENST00000563505 CUL9Q8IWT3 2517 aa28.07■■■□□ 2.08
STUB1-202ENST00000563505 TMEM265A0A087WTH1 108 aa28.07■■■□□ 2.08
STUB1-202ENST00000563505 MCM5P33992 734 aa28.07■■■□□ 2.08
STUB1-202ENST00000563505 PURAQ00577 322 aaKnown RBP28.07■■■□□ 2.08
STUB1-202ENST00000563505 TTLL4Q14679 1199 aa28.07■■■□□ 2.08
STUB1-202ENST00000563505 STXBP2Q15833 593 aa28.07■■■□□ 2.08
STUB1-202ENST00000563505 HOMER1Q86YM7 354 aa28.07■■■□□ 2.08
STUB1-202ENST00000563505 PHF6Q8IWS0 365 aaKnown RBP eCLIP28.07■■■□□ 2.08
STUB1-202ENST00000563505 PXMP2Q9NR77 195 aa28.07■■■□□ 2.08
STUB1-202ENST00000563505 MYH6P13533 1939 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 PNMA6FA0A0J9YX94 578 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 A6NJR5 290 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 SH2B2O14492 632 aaPredicted RBP28.06■■■□□ 2.08
STUB1-202ENST00000563505 ARHGEF16Q5VV41 709 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 CASC1Q6TDU7 716 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 ZNF654Q8IZM8 581 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 SAMD3Q8N6K7 520 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 TMEM87BQ96K49 555 aa28.06■■■□□ 2.08
STUB1-202ENST00000563505 TTYH1Q9H313 450 aaPredicted RBP28.06■■■□□ 2.08
STUB1-202ENST00000563505 HSFX4A0A1B0GTS1 333 aaPredicted RBP28.05■■■□□ 2.08
STUB1-202ENST00000563505 HSFX3A0A1B0GWH4 333 aaPredicted RBP28.05■■■□□ 2.08
STUB1-202ENST00000563505 DDAH1O94760 285 aa28.05■■■□□ 2.08
STUB1-202ENST00000563505 NR3C2P08235 984 aa28.05■■■□□ 2.08
STUB1-202ENST00000563505 EIF2AK2P19525 551 aaKnown RBP28.05■■■□□ 2.08
STUB1-202ENST00000563505 TRAF1Q13077 416 aa28.05■■■□□ 2.08
STUB1-202ENST00000563505 PPIGQ13427 754 aaKnown RBP eCLIP28.05■■■□□ 2.082e-6■■■□□ 16.7
STUB1-202ENST00000563505 EIF3JO75822 258 aaKnown RBP28.04■■■□□ 2.08
STUB1-202ENST00000563505 MYL3P08590 195 aa28.04■■■□□ 2.08
STUB1-202ENST00000563505 SEPT14Q6ZU15 432 aa28.04■■■□□ 2.08
STUB1-202ENST00000563505 TMTC2Q8N394 836 aa28.04■■■□□ 2.08
STUB1-202ENST00000563505 MTG1Q9BT17 334 aaPredicted RBP28.04■■■□□ 2.08
STUB1-202ENST00000563505 MYL10Q9BUA6 226 aa28.04■■■□□ 2.08
STUB1-202ENST00000563505 TRPV6Q9H1D0 765 aa28.04■■■□□ 2.08
STUB1-202ENST00000563505 B4GALT4O60513 344 aa28.03■■■□□ 2.08
STUB1-202ENST00000563505 SMARCA1P28370 1054 aa28.03■■■□□ 2.08
STUB1-202ENST00000563505 LIFRP42702 1097 aa28.03■■■□□ 2.08
STUB1-202ENST00000563505 C16orf59Q7L2K0 433 aa28.03■■■□□ 2.08
STUB1-202ENST00000563505 PPP1R12CQ9BZL4 782 aa28.03■■■□□ 2.08
STUB1-202ENST00000563505 KPNA6O60684 536 aa28.02■■■□□ 2.08
STUB1-202ENST00000563505 HOXA13P31271 388 aaPredicted RBP28.02■■■□□ 2.08
STUB1-202ENST00000563505 LY6KQ17RY6 165 aa28.02■■■□□ 2.08
STUB1-202ENST00000563505 BRDTQ58F21 947 aaPredicted RBP28.02■■■□□ 2.08
STUB1-202ENST00000563505 TMEM199Q8N511 208 aa28.02■■■□□ 2.08
STUB1-202ENST00000563505 MAFAQ8NHW3 353 aaPredicted RBP28.02■■■□□ 2.08
STUB1-202ENST00000563505 CTCFLQ8NI51 663 aaPredicted RBP28.02■■■□□ 2.08
STUB1-202ENST00000563505 PDCD2LQ9BRP1 358 aa28.02■■■□□ 2.08
STUB1-202ENST00000563505 SPZ1Q9BXG8 430 aa28.02■■■□□ 2.08
STUB1-202ENST00000563505 ALDH8A1Q9H2A2 487 aaPredicted RBP28.02■■■□□ 2.08
STUB1-202ENST00000563505 DDX41Q9UJV9 622 aaKnown RBP28.02■■■□□ 2.08
STUB1-202ENST00000563505 KIF5BP33176 963 aa28.01■■■□□ 2.07
STUB1-202ENST00000563505 CYP2C18P33260 490 aa28.01■■■□□ 2.07
STUB1-202ENST00000563505 ARHGAP1Q07960 439 aa28.01■■■□□ 2.07
STUB1-202ENST00000563505 MYLIPQ8WY64 445 aa28.01■■■□□ 2.07
STUB1-202ENST00000563505 BUD13Q9BRD0 619 aaKnown RBP eCLIP28.01■■■□□ 2.072e-6■■■□□ 16.2
STUB1-202ENST00000563505 GCOM1H8Y6P7 765 aaPredicted RBP28■■■□□ 2.07
STUB1-202ENST00000563505 CDC45O75419 566 aa28■■■□□ 2.07
STUB1-202ENST00000563505 RGS20O76081 388 aa28■■■□□ 2.07
STUB1-202ENST00000563505 POLR2MP0CAP2 368 aa28■■■□□ 2.07
STUB1-202ENST00000563505 CSF2RAP15509 400 aa28■■■□□ 2.07
STUB1-202ENST00000563505 VSIG10LQ86VR7 867 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms