RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 SYT8Q8NBV8 401 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 FEZF2Q8TBJ5 459 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 FRS2Q8WU20 508 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 DPF3Q92784 378 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 PEX11GQ96HA9 241 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 KRTAP4-9Q9BYQ8 210 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 RNF38Q9H0F5 515 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 XYLT2Q9H1B5 865 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 CYP26B1Q9NR63 512 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 MARCH2Q9P0N8 246 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 NUDT5Q9UKK9 219 aa5.49□□□□□ -1.53
HMGB1P33-201ENST00000563485 OTOL1A6NHN0 477 aaPredicted RBP5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 FFAR3O14843 346 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 DDAH1O94760 285 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 NTRK1P04629 796 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 NCAM1P13591 858 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 VWA3BQ502W6 1294 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 MCF2L2Q86YR7 1114 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 NLGN1Q8N2Q7 840 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 NPLOC4Q8TAT6 608 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 PLEKHO2Q8TD55 490 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 FNIP1Q8TF40 1166 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 ZNF408Q9H9D4 720 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 BTG4Q9NY30 223 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 FAN1Q9Y2M0 1017 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 SIT1Q9Y3P8 196 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 PMF1-BGLAPU3KQ54 211 aa5.48□□□□□ -1.53
HMGB1P33-201ENST00000563485 B8ZZF3 427 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 SASH1O94885 1247 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 SNRPB2P08579 225 aaKnown RBP5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 HTRA3P83110 453 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 ARID5AQ03989 594 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 CCDC103Q8IW40 242 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 TEX2Q8IWB9 1127 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 SP8Q8IXZ3 490 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 ADGRG2Q8IZP9 1017 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 LRP2BPQ9P2M1 347 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 TMEFF2Q9UIK5 374 aaPredicted RBP5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 NCANO14594 1321 aa5.47□□□□□ -1.53
HMGB1P33-201ENST00000563485 A0A1B0GTL3 188 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 ARNTLO00327 626 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 GJB6O95452 261 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 DNAJA1P31689 397 aaKnown RBP5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 ECI1P42126 302 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 RBM25P49756 843 aaKnown RBP5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 CAP1Q01518 475 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 SLC9A5Q14940 896 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 SF1Q15637 639 aaKnown RBP5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 FXNQ16595 210 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 PRSS53Q2L4Q9 553 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 B3GNT8Q7Z7M8 397 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 ZDHHC14Q8IZN3 488 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 HNRNPLLQ8WVV9 542 aaKnown RBP5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 RELTQ969Z4 430 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 LUC7LQ9NQ29 371 aaKnown RBP5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 RTEL1Q9NZ71 1219 aa5.46□□□□□ -1.54
HMGB1P33-201ENST00000563485 C22orf46C9J442 243 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 PRRG2O14669 202 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 FPR2P25090 351 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 HOXC12P31275 282 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 SLURP1P55000 103 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 DLX2Q07687 328 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 NFIXQ14938 502 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 NLRP10Q86W26 655 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 KREMEN2Q8NCW0 462 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 SMARCC2Q8TAQ2 1214 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 ZNF526Q8TF50 670 aaPredicted RBP5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 FBXL7Q9UJT9 491 aa5.45□□□□□ -1.54
HMGB1P33-201ENST00000563485 MEFVO15553 781 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 ZBTB7AO95365 584 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 SCG5P05408 212 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 BUD31P41223 144 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 KCNJ6P48051 423 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 GFRA1P56159 465 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 RPL11P62913 178 aaKnown RBP5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 CACNB2Q08289 660 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 SLC10A6Q3KNW5 377 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 E4F1Q66K89 784 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 IQCEQ6IPM2 695 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 LIPIQ6XZB0 460 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 SAPCD2Q86UD0 394 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 DCP2Q8IU60 420 aaKnown RBP5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 CELF2-AS1Q8N7Q2 184 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 TMEM145Q8NBT3 493 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 CPA5Q8WXQ8 436 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 DIO2Q92813 273 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 NOX5Q96PH1 765 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 ADAM7Q9H2U9 754 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 ST7Q9NRC1 585 aa5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 TIMM13Q9Y5L4 95 aaPredicted RBP5.44□□□□□ -1.54
HMGB1P33-201ENST00000563485 SGSM2O43147 1006 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 FOXD2O60548 495 aaPredicted RBP5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 C8BP07358 591 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 LCP1P13796 627 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 BCL6P41182 706 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 KCNAB2Q13303 367 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 DENND5AQ6IQ26 1287 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 EEPD1Q7L9B9 569 aa5.43□□□□□ -1.54
HMGB1P33-201ENST00000563485 PPIL6Q8IXY8 311 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms