RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 NFIBO00712 420 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 CAVIN2O95810 425 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 FDX1P10109 184 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 CIITAP33076 1130 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 SARSP49591 514 aaKnown RBP20.39■□□□□ 0.85
COMMD4-208ENST00000563220 TTLL12Q14166 644 aaPredicted RBP20.39■□□□□ 0.85
COMMD4-208ENST00000563220 COG2Q14746 738 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 ANKRD13AQ8IZ07 590 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 REPS2Q8NFH8 660 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 MTRQ99707 1265 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 PYM1Q9BRP8 204 aaKnown RBP20.39■□□□□ 0.85
COMMD4-208ENST00000563220 MMTAG2Q9BU76 263 aaKnown RBP20.39■□□□□ 0.85
COMMD4-208ENST00000563220 DISC1Q9NRI5 854 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 CLEC11AQ9Y240 323 aa20.39■□□□□ 0.85
COMMD4-208ENST00000563220 MYH7BA7E2Y1 1941 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 SCN4AP35499 1836 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 FAM86B1E9PN63 330 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 CYP3A4P08684 503 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 FAM86B2P0C5J1 330 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 HSD17B4P51659 736 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 IQCB1Q15051 598 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 NAALADL2Q58DX5 795 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 MUM1L1Q5H9M0 696 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 NT5DC1Q5TFE4 455 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 CABP7Q86V35 215 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 LRRC15Q8TF66 581 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 UIMC1Q96RL1 719 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 TTC12Q9H892 705 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-208ENST00000563220 KCNMB3Q9NPA1 279 aa20.38■□□□□ 0.85
COMMD4-208ENST00000563220 CTDP1Q9Y5B0 961 aaPredicted RBP20.38■□□□□ 0.85
COMMD4-208ENST00000563220 CASP1P29466 404 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 PPATQ06203 517 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 PDIA5Q14554 519 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 ZRSR1Q15695 479 aaKnown RBP20.37■□□□□ 0.85
COMMD4-208ENST00000563220 Q4G0T1 1027 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 SPATA20Q8TB22 786 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 STAMQ92783 540 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 LENG9Q96B70 501 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 PLIN2Q99541 437 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 HOMER2Q9NSB8 354 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 IRF6O14896 467 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 FMR1Q06787 632 aaKnown RBP eCLIP20.37■□□□□ 0.85
COMMD4-208ENST00000563220 TMEM266Q2M3C6 531 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 PRR16Q569H4 304 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 RRAGBQ5VZM2 374 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 MAP1SQ66K74 1059 aaPredicted RBP20.37■□□□□ 0.85
COMMD4-208ENST00000563220 ERO1BQ86YB8 467 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 CYP2W1Q8TAV3 490 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 OTUD5Q96G74 571 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 LRWD1Q9UFC0 647 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 MAN1B1Q9UKM7 699 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 RIPK3Q9Y572 518 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 WDR90Q96KV7 1748 aa20.37■□□□□ 0.85
COMMD4-208ENST00000563220 PAPPA2Q9BXP8 1791 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 POTEMA6NI47 508 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 BMP6P22004 513 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 STAT6P42226 847 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 GHRHRQ02643 423 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 TREML2Q5T2D2 321 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 ANP32BQ92688 251 aaKnown RBP20.36■□□□□ 0.85
COMMD4-208ENST00000563220 CCDC34Q96HJ3 373 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 COL20A1Q9P218 1284 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 CCDC39Q9UFE4 941 aa20.36■□□□□ 0.85
COMMD4-208ENST00000563220 MARCH6O60337 910 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 UBXN2AP68543 259 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 DPYDQ12882 1025 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 MCF2L2Q86YR7 1114 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 RASSF8Q8NHQ8 419 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 ETNPPLQ8TBG4 499 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 SMARCE1Q969G3 411 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 TRERF1Q96PN7 1200 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 PCDHA12Q9UN75 941 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 SPDYE5A6NIY4 337 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 TRAF5O00463 557 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 AP5Z1O43299 807 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 PLCG1P19174 1290 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 TMEM132BQ14DG7 1078 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 ARMC9Q7Z3E5 817 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 DHX40Q8IX18 779 aaKnown RBP20.35■□□□□ 0.85
COMMD4-208ENST00000563220 NUDT12Q9BQG2 462 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 RRAGCQ9HB90 399 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 HOXC10Q9NYD6 342 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 PNMA2Q9UL42 364 aa20.35■□□□□ 0.85
COMMD4-208ENST00000563220 ZNF214Q9UL59 606 aaPredicted RBP20.35■□□□□ 0.85
COMMD4-208ENST00000563220 SPDYE16A6NNV3 312 aaPredicted RBP20.34■□□□□ 0.85
COMMD4-208ENST00000563220 ZNF76P36508 570 aa20.34■□□□□ 0.85
COMMD4-208ENST00000563220 PPP1R9BQ96SB3 815 aa20.34■□□□□ 0.85
COMMD4-208ENST00000563220 RAB34Q9BZG1 259 aa20.34■□□□□ 0.85
COMMD4-208ENST00000563220 OTOFQ9HC10 1997 aa20.33■□□□□ 0.85
COMMD4-208ENST00000563220 IGLV3-22A0A075B6J6 115 aa20.33■□□□□ 0.85
COMMD4-208ENST00000563220 A0A0G2JLL6 359 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-208ENST00000563220 MORC3Q14149 939 aa20.33■□□□□ 0.85
COMMD4-208ENST00000563220 LDLRAD1Q5T700 205 aa20.33■□□□□ 0.85
COMMD4-208ENST00000563220 PRRT2Q7Z6L0 340 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-208ENST00000563220 SYTL5Q8TDW5 730 aaPredicted RBP20.33■□□□□ 0.85
COMMD4-208ENST00000563220 BLZF1Q9H2G9 400 aa20.33■□□□□ 0.85
COMMD4-208ENST00000563220 RLFQ13129 1914 aa20.33■□□□□ 0.85
COMMD4-208ENST00000563220 CXCL11O14625 94 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 TBX3O15119 743 aa20.33■□□□□ 0.84
COMMD4-208ENST00000563220 MSH4O15457 936 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms