RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 RILPL2Q969X0 211 aa17.05■□□□□ 0.32
SPG7-205ENST00000561945 GAS2L1Q99501 681 aaPredicted RBP17.05■□□□□ 0.32
SPG7-205ENST00000561945 DSCC1Q9BVC3 393 aa17.05■□□□□ 0.32
SPG7-205ENST00000561945 TRMT13Q9NUP7 481 aaKnown RBP17.05■□□□□ 0.32
SPG7-205ENST00000561945 YBX2Q9Y2T7 364 aaKnown RBP17.05■□□□□ 0.32
SPG7-205ENST00000561945 ABCB11O95342 1321 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 IGHDP01880 384 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 GOLGA8HP0CJ92 632 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 RFC2P35250 354 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 GHRHRQ02643 423 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 ADGRE1Q14246 886 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 NBPF20Q3BBV1 942 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 ASPRV1Q53RT3 343 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 BRDTQ58F21 947 aaPredicted RBP17.04■□□□□ 0.32
SPG7-205ENST00000561945 TJAP1Q5JTD0 557 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 IQCA1Q86XH1 822 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 SCLYQ96I15 445 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 ZKSCAN3Q9BRR0 538 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 PRDM12Q9H4Q4 367 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 PCDHA11Q9Y5I1 949 aa17.04■□□□□ 0.32
SPG7-205ENST00000561945 HIP1O00291 1037 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 KDM4AO75164 1064 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 ARIH2O95376 493 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 MYL3P08590 195 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 TXNP10599 105 aaKnown RBP17.03■□□□□ 0.32
SPG7-205ENST00000561945 TTLL4Q14679 1199 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 CDC37Q16543 378 aaPredicted RBP17.03■□□□□ 0.32
SPG7-205ENST00000561945 SESTD1Q86VW0 696 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 ADGRF4Q8IZF3 695 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 ENAHQ8N8S7 591 aaPredicted RBP17.03■□□□□ 0.32
SPG7-205ENST00000561945 ATXN2LQ8WWM7 1075 aaKnown RBP17.03■□□□□ 0.32
SPG7-205ENST00000561945 IWS1Q96ST2 819 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 ZSCAN10Q96SZ4 725 aaPredicted RBP17.03■□□□□ 0.32
SPG7-205ENST00000561945 NKX2-4Q9H2Z4 354 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 SLC28A3Q9HAS3 691 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 PRDM6Q9NQX0 595 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 GPHNQ9NQX3 736 aaPredicted RBP17.03■□□□□ 0.32
SPG7-205ENST00000561945 ZSWIM5Q9P217 1185 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 SLC4A7Q9Y6M7 1214 aa17.03■□□□□ 0.32
SPG7-205ENST00000561945 CYP2C9P11712 490 aa17.02■□□□□ 0.32
SPG7-205ENST00000561945 CWC27Q6UX04 472 aaKnown RBP17.02■□□□□ 0.32
SPG7-205ENST00000561945 SYTL5Q8TDW5 730 aaPredicted RBP17.02■□□□□ 0.32
SPG7-205ENST00000561945 COPS5Q92905 334 aa17.02■□□□□ 0.32
SPG7-205ENST00000561945 CTAGE1Q96RT6 745 aa17.02■□□□□ 0.32
SPG7-205ENST00000561945 UBA5Q9GZZ9 404 aa17.02■□□□□ 0.32
SPG7-205ENST00000561945 CPVLQ9H3G5 476 aa17.02■□□□□ 0.32
SPG7-205ENST00000561945 COL20A1Q9P218 1284 aa17.02■□□□□ 0.32
SPG7-205ENST00000561945 PTPRSQ13332 1948 aa17.02■□□□□ 0.31
SPG7-205ENST00000561945 IQCF3P0C7M6 154 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 POU3F3P20264 500 aaPredicted RBP17.01■□□□□ 0.31
SPG7-205ENST00000561945 ARHGAP1Q07960 439 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 USH1GQ495M9 461 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 B4GALNT3Q6L9W6 998 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 MCF2L2Q86YR7 1114 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 PHOSPHO2Q8TCD6 241 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 NSUN6Q8TEA1 469 aaKnown RBP17.01■□□□□ 0.31
SPG7-205ENST00000561945 TBC1D5Q92609 795 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 EMID1Q96A84 441 aaPredicted RBP17.01■□□□□ 0.31
SPG7-205ENST00000561945 KAT14Q9H8E8 782 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 JMJD4Q9H9V9 463 aa17.01■□□□□ 0.31
SPG7-205ENST00000561945 B4E1Z4 1266 aa17■□□□□ 0.31
SPG7-205ENST00000561945 ATP2A2P16615 1042 aaKnown RBP17■□□□□ 0.31
SPG7-205ENST00000561945 RBL2Q08999 1139 aa17■□□□□ 0.31
SPG7-205ENST00000561945 QRICH1Q2TAL8 776 aa17■□□□□ 0.31
SPG7-205ENST00000561945 MTMR8Q96EF0 704 aa17■□□□□ 0.31
SPG7-205ENST00000561945 TAAR1Q96RJ0 339 aa17■□□□□ 0.31
SPG7-205ENST00000561945 KRT23Q9C075 422 aa17■□□□□ 0.31
SPG7-205ENST00000561945 CNNM2Q9H8M5 875 aa17■□□□□ 0.31
SPG7-205ENST00000561945 DIAPH3Q9NSV4 1193 aa17■□□□□ 0.31
SPG7-205ENST00000561945 MAP3K20Q9NYL2 800 aaKnown RBP17■□□□□ 0.31
SPG7-205ENST00000561945 CTNNA3Q9UI47 895 aa17■□□□□ 0.31
SPG7-205ENST00000561945 NCOR1O75376 2440 aa17■□□□□ 0.31
SPG7-205ENST00000561945 OPLAHO14841 1288 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 GH1P01241 217 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 MMP3P08254 477 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 HSD17B4P51659 736 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 RABGGTBP53611 331 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 SEC23AQ15436 765 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 STXBP2Q15833 593 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 IMMTQ16891 758 aaKnown RBP16.99■□□□□ 0.31
SPG7-205ENST00000561945 KAT2BQ92831 832 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 SLC9A7Q96T83 725 aa16.99■□□□□ 0.31
SPG7-205ENST00000561945 MRPL11Q9Y3B7 192 aaKnown RBP16.99■□□□□ 0.31
SPG7-205ENST00000561945 PARP1P09874 1014 aaKnown RBP16.98■□□□□ 0.31
SPG7-205ENST00000561945 ACTN1P12814 892 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 HOXD8P13378 290 aaPredicted RBP16.98■□□□□ 0.31
SPG7-205ENST00000561945 BFSP2Q13515 415 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 FAM47CQ5HY64 1035 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 FBXO11Q86XK2 927 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 SAMD3Q8N6K7 520 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 CAGE1Q8TC20 777 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 AFAP1L1Q8TED9 768 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 ASB2Q96Q27 587 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 RMDN3Q96TC7 470 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 IL25Q9H293 177 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 THEGQ9P2T0 379 aa16.98■□□□□ 0.31
SPG7-205ENST00000561945 DDX41Q9UJV9 622 aaKnown RBP16.98■□□□□ 0.31
SPG7-205ENST00000561945 TRIP12Q14669 1992 aaPredicted RBP16.98■□□□□ 0.31
SPG7-205ENST00000561945 TET1Q8NFU7 2136 aa16.97■□□□□ 0.31
SPG7-205ENST00000561945 TRANK1O15050 2925 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms