RNA–Protein interactions for RNA: ENST00000561825.1

KLHDC4-206, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-206ENST00000561825 TRIM43BA6NCK2 446 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 NKRFO15226 690 aaKnown RBP eCLIP13.12□□□□□ -0.311e-11■■■■■ 43.4
KLHDC4-206ENST00000561825 PRC1O43663 620 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 CLTBP09497 229 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 CDK7P50613 346 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 FSCN1Q16658 493 aaKnown RBP13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 SLC35G1Q2M3R5 365 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 HOMER1Q86YM7 354 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 TDHQ8IZJ6 230 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 SYTL5Q8TDW5 730 aaPredicted RBP13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 NSUN6Q8TEA1 469 aaKnown RBP13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 SNX21Q969T3 373 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 TAAR1Q96RJ0 339 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 PIGSQ96S52 555 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 LZTS2Q9BRK4 669 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 WDR11Q9BZH6 1224 aa13.12□□□□□ -0.31
KLHDC4-206ENST00000561825 LTBP2Q14767 1821 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 PNMA6FA0A0J9YX94 578 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 A0A0U1RQG5 324 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 DCDC2CA8MYV0 355 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 SOX1O00570 391 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 SH2B2O14492 632 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 CYTH3O43739 400 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 ZEB2O60315 1214 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 PPP1R11O60927 126 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 CFBP00751 764 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 CALM1P0DP23 149 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 CALM2P0DP24 149 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 CALM3P0DP25 149 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 KIF5BP33176 963 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 HSD17B4P51659 736 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 COL9A3Q14050 684 aaPredicted RBP13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 LRIT3Q3SXY7 679 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 BADQ92934 168 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 COL20A1Q9P218 1284 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 PCDHA1Q9Y5I3 950 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 LAMA3Q16787 3333 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 MROH7Q68CQ1 1323 aa13.11□□□□□ -0.31
KLHDC4-206ENST00000561825 ARVCFO00192 962 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 OPLAHO14841 1288 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 KIAA0355O15063 1070 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 ST18O60284 1047 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 GNAQP50148 359 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 FAAP100Q0VG06 881 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 GPR153Q6NV75 609 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 CXCL17Q6UXB2 119 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 NFXL1Q6ZNB6 911 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 SGMS1Q86VZ5 419 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 ZNF654Q8IZM8 581 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 SLC43A3Q8NBI5 491 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 CTCFLQ8NI51 663 aaPredicted RBP13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 SCFD2Q8WU76 684 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 PIBF1Q8WXW3 757 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 LRCH3Q96II8 777 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 NEK1Q96PY6 1258 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 RMDN3Q96TC7 470 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 MYL10Q9BUA6 226 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 SPZ1Q9BXG8 430 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 TMEM39AQ9NV64 488 aa13.1□□□□□ -0.31
KLHDC4-206ENST00000561825 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 RAG1P15918 1043 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 ITGB8P26012 769 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 EXOSC10Q01780 885 aaKnown RBP13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 KRT32Q14532 448 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 PPP2R5BQ15173 497 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 STXBP2Q15833 593 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 ARHGEF16Q5VV41 709 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 OR6J1Q8NGC5 347 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 COPS5Q92905 334 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 KCNB2Q92953 911 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 LRRC2Q9BYS8 371 aa13.09□□□□□ -0.31
KLHDC4-206ENST00000561825 SZT2Q5T011 3432 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 A6NJR5 290 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 KPNA6O60684 536 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 EIF3JO75822 258 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 HMGB1P09429 215 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 TXNP10599 105 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 EIF2AK2P19525 551 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 HSPA4P34932 840 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 CPT1AP50416 773 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 ITGA7Q13683 1181 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 TTLL4Q14679 1199 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 CCDC62Q6P9F0 684 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 SEPT14Q6ZU15 432 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 DHX32Q7L7V1 743 aaKnown RBP13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 PXMP2Q9NR77 195 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 SLC12A7Q9Y666 1083 aa13.08□□□□□ -0.32
KLHDC4-206ENST00000561825 TLR3O15455 904 aaKnown RBP13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 ARIH2O95376 493 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 NR3C2P08235 984 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 MYL3P08590 195 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 RXRAP19793 462 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 MCM2P49736 904 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 PSMC6P62333 389 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 BRDTQ58F21 947 aaPredicted RBP13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 RAB11FIP4Q86YS3 637 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 FAM126BQ8IXS8 530 aa13.07□□□□□ -0.32
KLHDC4-206ENST00000561825 RASEFQ8IZ41 740 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms