RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 CPA5Q8WXQ8 436 aa7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 PPP1R14AQ96A00 147 aa7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 BCAS3Q9H6U6 928 aa7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 CAPN10Q9HC96 672 aa7.94□□□□□ -1.14
HMBOX1-216ENST00000561377 FUCA1P04066 466 aa7.93□□□□□ -1.14
HMBOX1-216ENST00000561377 LIPIQ6XZB0 460 aa7.93□□□□□ -1.14
HMBOX1-216ENST00000561377 VPS37DQ86XT2 251 aa7.93□□□□□ -1.14
HMBOX1-216ENST00000561377 DCP2Q8IU60 420 aaKnown RBP7.93□□□□□ -1.14
HMBOX1-216ENST00000561377 GPRC5CQ9NQ84 441 aa7.93□□□□□ -1.14
HMBOX1-216ENST00000561377 SH3D21A4FU49 640 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 CELA3BP08861 270 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 TNNI3KQ59H18 835 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 GTF2IRD2BQ6EKJ0 949 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 GTF2IRD2Q86UP8 949 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 KRTAP4-2Q9BYR5 136 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 ADAM7Q9H2U9 754 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 CYP26B1Q9NR63 512 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 MARCH2Q9P0N8 246 aa7.92□□□□□ -1.14
HMBOX1-216ENST00000561377 NTRK1P04629 796 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 SSBP05455 408 aaKnown RBP eCLIP7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 THBDP07204 575 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 CACNB2Q08289 660 aaPredicted RBP7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 IQCEQ6IPM2 695 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 SMARCC2Q8TAQ2 1214 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 ZNF526Q8TF50 670 aaPredicted RBP7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 MRGPRX3Q96LB0 322 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 NKX2-4Q9H2Z4 354 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 ACTR10Q9NZ32 417 aa7.91□□□□□ -1.14
HMBOX1-216ENST00000561377 SMAD7O15105 426 aaKnown RBP7.9□□□□□ -1.14
HMBOX1-216ENST00000561377 MBLAC2Q68D91 279 aa7.9□□□□□ -1.14
HMBOX1-216ENST00000561377 ADGRG2Q8IZP9 1017 aa7.9□□□□□ -1.14
HMBOX1-216ENST00000561377 PLEKHO2Q8TD55 490 aa7.9□□□□□ -1.14
HMBOX1-216ENST00000561377 SPATA25Q9BR10 227 aa7.9□□□□□ -1.14
HMBOX1-216ENST00000561377 AP5M1Q9H0R1 490 aa7.9□□□□□ -1.14
HMBOX1-216ENST00000561377 USP40Q9NVE5 1235 aa7.9□□□□□ -1.14
HMBOX1-216ENST00000561377 A0A1B0GTL3 188 aa7.89□□□□□ -1.15
HMBOX1-216ENST00000561377 ERCC5P28715 1186 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-216ENST00000561377 SKOR2Q2VWA4 1001 aaPredicted RBP7.89□□□□□ -1.15
HMBOX1-216ENST00000561377 KRTAP9-3Q9BYQ3 159 aa7.89□□□□□ -1.15
HMBOX1-216ENST00000561377 KRTAP4-11Q9BYQ6 195 aa7.89□□□□□ -1.15
HMBOX1-216ENST00000561377 PCDH18Q9HCL0 1135 aa7.89□□□□□ -1.15
HMBOX1-216ENST00000561377 DLX2Q07687 328 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 GNL2Q13823 731 aaKnown RBP7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 NT5DC1Q5TFE4 455 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 LARP1BQ659C4 914 aaKnown RBP7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 E4F1Q66K89 784 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 C6orf15Q6UXA7 325 aaPredicted RBP7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 TTLL7Q6ZT98 887 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 FAM178BQ8IXR5 827 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 CARFQ8N187 725 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 FRS2Q8WU20 508 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 DPF3Q92784 378 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 BTG4Q9NY30 223 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 NTMQ9P121 344 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 LRP2BPQ9P2M1 347 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 SIT1Q9Y3P8 196 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 MRVI1Q9Y6F6 885 aa7.88□□□□□ -1.15
HMBOX1-216ENST00000561377 C22orf46C9J442 243 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 CYP2C8P10632 490 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 HOXC12P31275 282 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 GTF2A2P52657 109 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 RPL11P62913 178 aaKnown RBP7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 INF2Q27J81 1249 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 SV2CQ496J9 727 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 ZFYVE27Q5T4F4 411 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 ETV3LQ6ZN32 361 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 PRRT2Q7Z6L0 340 aaPredicted RBP7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 TEX2Q8IWB9 1127 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 NPLOC4Q8TAT6 608 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 BTN2A2Q8WVV5 523 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 SEC14L1Q92503 715 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 ZBTB8AQ96BR9 441 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 NOX5Q96PH1 765 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 PRKAG3Q9UGI9 489 aa7.87□□□□□ -1.15
HMBOX1-216ENST00000561377 MYO1BO43795 1136 aa7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 SMARCA5O60264 1052 aaPredicted RBP7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 SARSP49591 514 aaKnown RBP7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 KCNAB2Q13303 367 aa7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 UBXN11Q5T124 520 aa7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 ZNF227Q86WZ6 799 aa7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 DIO2Q92813 273 aa7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 BDH2Q9BUT1 245 aa7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 LGR4Q9BXB1 951 aa7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 TIMM13Q9Y5L4 95 aaPredicted RBP7.86□□□□□ -1.15
HMBOX1-216ENST00000561377 SUSD5O60279 629 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 DDAH1O94760 285 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 SNRPB2P08579 225 aaKnown RBP7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 SLC6A11P48066 632 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 GJA9P57773 515 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 PLP2Q04941 152 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 RTP5Q14D33 572 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 FXNQ16595 210 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 MROH9Q5TGP6 573 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 RIOX2Q8IUF8 465 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 DDX11Q96FC9 970 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 CCDC140Q96MF4 163 aa7.85□□□□□ -1.15
HMBOX1-216ENST00000561377 MEFVO15553 781 aaPredicted RBP7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 SGSM2O43147 1006 aa7.84□□□□□ -1.15
HMBOX1-216ENST00000561377 CPP00450 1065 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms