RNA–Protein interactions for RNA: ENST00000561367.1

KNSTRN-215, Transcript of kinetochore localized astrin (SPAG5) binding protein, human

TSL 2

Gene KNSTRN, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KNSTRN-215	ENST00000561367	PRMT2	P55345	433 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	FCGRT	P55899	365 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SLC35G1	Q2M3R5	365 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	GALNT17	Q6IS24	598 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCDC174	Q6PII3	467 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCDC83	Q8IWF9	413 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CCDC82	Q8N4S0	544 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	NECAB1	Q8N987	351 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	NSUN7	Q8NE18	718 aa	Known RBP	11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SMARCC2	Q8TAQ2	1214 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SLC26A6	Q9BXS9	759 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CPVL	Q9H3G5	476 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ACAD9	Q9H845	621 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CWC22	Q9HCG8	908 aa	Known RBP	11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RAVER2	Q9HCJ3	691 aa	Known RBP	11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	BARHL2	Q9NY43	387 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SLC5A4	Q9NY91	659 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PCDHA1	Q9Y5I3	950 aa		11.41	□□□□□ -0.58
KNSTRN-215	ENST00000561367	LOC102724159	A0A0B4J2E5	919 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ESYT2	A0FGR8	921 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PTPDC1	A2A3K4	754 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	FCER1A	P12319	257 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ALAS1	P13196	640 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ERCC3	P19447	782 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CTCF	P49711	727 aa	Predicted RBP	11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	GHRHR	Q02643	423 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	KCTD2	Q14681	263 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PWP2	Q15269	919 aa	Known RBP	11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367		Q3C1V9	767 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	NCAPG2	Q86XI2	1143 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	CMTR1	Q8N1G2	835 aa	Known RBP	11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SOCS4	Q8WXH5	440 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	PHKB	Q93100	1093 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	COA7	Q96BR5	231 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	AGBL1	Q96MI9	1066 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	TRERF1	Q96PN7	1200 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	RNF146	Q9NTX7	359 aa		11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	ORC3	Q9UBD5	711 aa	Predicted RBP	11.4	□□□□□ -0.58
KNSTRN-215	ENST00000561367	SLC15A5	A6NIM6	579 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	CTDNEP1	O95476	244 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	CALML3	P27482	149 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GNA11	P29992	359 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ANP32A	P39687	249 aa	Known RBP	11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MRPL12	P52815	198 aa	Known RBP	11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PKN1	Q16512	942 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	NYAP1	Q6ZVC0	841 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HEATR3	Q7Z4Q2	680 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PLEKHH3	Q7Z736	793 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	FAM184A	Q8NB25	1140 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	BICD2	Q8TD16	824 aa		11.39	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PIK3CD	O00329	1044 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	TNPO2	O14787	897 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PPP1R11	O60927	126 aa	Predicted RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HSP90AA1	P07900	732 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HSPA1A	P0DMV8	641 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HSPA1B	P0DMV9	641 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PDC	P20941	246 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PSMC4	P43686	418 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	NAPA	P54920	295 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ST3GAL1	Q11201	340 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	TRIM29	Q14134	588 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	USH1G	Q495M9	461 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GPR142	Q7Z601	462 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	TRMT44	Q8IYL2	757 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ANKRD35	Q8N283	1001 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	CUL5	Q93034	780 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MPHOSPH6	Q99547	160 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	NUDT12	Q9BQG2	462 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ZMYND12	Q9H0C1	365 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PORCN	Q9H237	461 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	R3HDML	Q9H3Y0	253 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	C6orf50	Q9HD87	102 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	ADD3	Q9UEY8	706 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SMC3	Q9UQE7	1217 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	DIS3	Q9Y2L1	958 aa	Known RBP	11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367	RIPK3	Q9Y572	518 aa		11.38	□□□□□ -0.59
KNSTRN-215	ENST00000561367		B4DLN1	442 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GCOM1	H8Y6P7	765 aa	Predicted RBP	11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	STXBP3	O00186	592 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	FOS	P01100	380 aa	Predicted RBP	11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HOXC6	P09630	235 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	POLR2M	P0CAP2	368 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	XRCC5	P13010	732 aa	Known RBP	11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	HSD17B4	P51659	736 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	SNAP25	P60880	206 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	GRB14	Q14449	540 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	WWC2	Q6AWC2	1192 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	RNF207	Q6ZRF8	634 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MSL3	Q8N5Y2	521 aa	Known RBP	11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	DNER	Q8NFT8	737 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	CLEC4D	Q8WXI8	215 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PIBF1	Q8WXW3	757 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	DDX11	Q96FC9	970 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	MMP19	Q99542	508 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	PSTPIP2	Q9H939	334 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	EFCC1	Q9HA90	598 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	BRMS1	Q9HCU9	246 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	RIC8A	Q9NPQ8	531 aa		11.37	□□□□□ -0.59
KNSTRN-215	ENST00000561367	COL11A1	P12107	1806 aa	Predicted RBP	11.37	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms