RNA–Protein interactions for RNA: ENST00000561342.5

IRF9-213, Transcript of interferon regulatory factor 9, humanhuman

TSL 5

Gene IRF9, Length 1,066 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF9-213ENST00000561342 PBXIP1Q96AQ6 731 aa13.95□□□□□ -0.18
IRF9-213ENST00000561342 FGD4Q96M96 766 aa13.95□□□□□ -0.18
IRF9-213ENST00000561342 POP1Q99575 1024 aaKnown RBP13.95□□□□□ -0.18
IRF9-213ENST00000561342 RNF146Q9NTX7 359 aa13.95□□□□□ -0.18
IRF9-213ENST00000561342 TRMT13Q9NUP7 481 aaKnown RBP13.95□□□□□ -0.18
IRF9-213ENST00000561342 CTNNA3Q9UI47 895 aa13.95□□□□□ -0.18
IRF9-213ENST00000561342 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
IRF9-213ENST00000561342 ISY1Q9ULR0 285 aaKnown RBP13.95□□□□□ -0.18
IRF9-213ENST00000561342 USP34Q70CQ2 3546 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 TNKSO95271 1327 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 DYNC1LI2O43237 492 aaPredicted RBP13.94□□□□□ -0.18
IRF9-213ENST00000561342 FGRP09769 529 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 MCCP23508 829 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 IRS1P35568 1242 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 ERVK-21P61565 698 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 TCF15Q12870 199 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 HERC4Q5GLZ8 1057 aaPredicted RBP13.94□□□□□ -0.18
IRF9-213ENST00000561342 EP400NLQ6ZTU2 488 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 CCDC144CPQ8IYA2 1237 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 OTUD7AQ8TE49 926 aaPredicted RBP13.94□□□□□ -0.18
IRF9-213ENST00000561342 DCAF4Q8WV16 495 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 CRBNQ96SW2 442 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 KATNBL1Q9H079 304 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 A1CFQ9NQ94 594 aaKnown RBP13.94□□□□□ -0.18
IRF9-213ENST00000561342 HOMER2Q9NSB8 354 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 MUTYHQ9UIF7 546 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 GNEQ9Y223 722 aaKnown RBP13.94□□□□□ -0.18
IRF9-213ENST00000561342 MYH4Q9Y623 1939 aa13.94□□□□□ -0.18
IRF9-213ENST00000561342 ZMYM6O95789 1325 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 LOC102724159A0A0B4J2E5 919 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.93□□□□□ -0.18
IRF9-213ENST00000561342 FOXP2O15409 715 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 IQCF3P0C7M6 154 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 PCP11498 1178 aaKnown RBP13.93□□□□□ -0.18
IRF9-213ENST00000561342 NT5C2P49902 561 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 HDAC1Q13547 482 aaPredicted RBP13.93□□□□□ -0.18
IRF9-213ENST00000561342 PWP2Q15269 919 aaKnown RBP13.93□□□□□ -0.18
IRF9-213ENST00000561342 PTPROQ16827 1216 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 ANKRD45Q5TZF3 282 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 EDAQ92838 391 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 TRERF1Q96PN7 1200 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 RAD9AQ99638 391 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 FAM86C1Q9NVL1 165 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 CFAP54Q96N23 3096 aa13.93□□□□□ -0.18
IRF9-213ENST00000561342 ASTN1O14525 1302 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 PITPNM1O00562 1244 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 RANBP6O60518 1105 aaKnown RBP13.92□□□□□ -0.18
IRF9-213ENST00000561342 ICAM1P05362 532 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 PDE1AP54750 535 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 CNTN2Q02246 1040 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 ATOH1Q92858 354 aaPredicted RBP13.92□□□□□ -0.18
IRF9-213ENST00000561342 IL17RBQ9NRM6 502 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 TCP11L1Q9NUJ3 509 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 PRR12Q9ULL5 1215 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 Q9Y3F1 56 aa13.92□□□□□ -0.18
IRF9-213ENST00000561342 ALAS1P13196 640 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 WDR5P61964 334 aaKnown RBP13.91□□□□□ -0.18
IRF9-213ENST00000561342 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 BFSP2Q13515 415 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 MCMDC2Q4G0Z9 681 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 TIGD5Q53EQ6 642 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 IQSEC1Q6DN90 963 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 BTNL9Q6UXG8 535 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 KCTD1Q719H9 257 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 MORC4Q8TE76 937 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 PABPC5Q96DU9 382 aaKnown RBP13.91□□□□□ -0.18
IRF9-213ENST00000561342 MRPL38Q96DV4 380 aaKnown RBP13.91□□□□□ -0.18
IRF9-213ENST00000561342 VTA1Q9NP79 307 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 CYP39A1Q9NYL5 469 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 ADD3Q9UEY8 706 aaKnown RBP13.91□□□□□ -0.18
IRF9-213ENST00000561342 CCPG1Q9ULG6 757 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 ZDBF2Q9HCK1 2354 aa13.91□□□□□ -0.18
IRF9-213ENST00000561342 LINC01553A4QN01 128 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 SOWAHBA6NEL2 793 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 TMEM221A6NGB7 291 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 M0R296 226 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 TOP1P11387 765 aaKnown RBP13.9□□□□□ -0.18
IRF9-213ENST00000561342 SMPD1P17405 629 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 MFAP1P55081 439 aaKnown RBP13.9□□□□□ -0.18
IRF9-213ENST00000561342 CCDC96Q2M329 555 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 TRIM67Q6ZTA4 783 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 RNF135Q8IUD6 432 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 FBXO22Q8NEZ5 403 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 TTC14Q96N46 770 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 RANBP17Q9H2T7 1088 aaKnown RBP13.9□□□□□ -0.18
IRF9-213ENST00000561342 POLR3EQ9NVU0 708 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 ZNF318Q5VUA4 2279 aa13.9□□□□□ -0.18
IRF9-213ENST00000561342 GJB5O95377 273 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 FGAP02671 866 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 ID4P47928 161 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 FAM47CQ5HY64 1035 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 VPS53Q5VIR6 699 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 TMCO2Q7Z6W1 182 aaPredicted RBP13.89□□□□□ -0.19
IRF9-213ENST00000561342 FBXL6Q8N531 539 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 BANK1Q8NDB2 785 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 MAF1Q9H063 256 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 GPHNQ9NQX3 736 aaPredicted RBP13.89□□□□□ -0.19
IRF9-213ENST00000561342 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 NOD1Q9Y239 953 aa13.89□□□□□ -0.19
IRF9-213ENST00000561342 NCK2O43639 380 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms