RNA–Protein interactions for RNA: ENST00000561334.1

SNX22-207, Transcript of sorting nexin 22, humanhuman

TSL 2

Gene SNX22, Length 2,789 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX22-207ENST00000561334 ZNF277Q9NRM2 450 aaPredicted RBP18.19■□□□□ 0.5
SNX22-207ENST00000561334 JRKLQ9Y4A0 524 aa18.19■□□□□ 0.5
SNX22-207ENST00000561334 PDHBP11177 359 aa18.19■□□□□ 0.5
SNX22-207ENST00000561334 PIK3AP1Q6ZUJ8 805 aa18.19■□□□□ 0.5
SNX22-207ENST00000561334 PACS2Q86VP3 889 aa18.19■□□□□ 0.5
SNX22-207ENST00000561334 SMYD4Q8IYR2 804 aaPredicted RBP18.19■□□□□ 0.5
SNX22-207ENST00000561334 VIPAS39Q9H9C1 493 aa18.19■□□□□ 0.5
SNX22-207ENST00000561334 FAM196BA6NMK8 535 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 MAGEA9P43362 315 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 GRIPAP1Q4V328 841 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.18■□□□□ 0.5
SNX22-207ENST00000561334 TDRD3Q9H7E2 651 aaKnown RBP18.18■□□□□ 0.5
SNX22-207ENST00000561334 FAM204AQ9H8W3 233 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 LRRC10BA6NIK2 292 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 STXBP3O00186 592 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 ZBTB7AO95365 584 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 GUCY2CP25092 1073 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 BLIDQ8IZY5 108 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 PRMT6Q96LA8 375 aaPredicted RBP18.18■□□□□ 0.5
SNX22-207ENST00000561334 BARHL2Q9NY43 387 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 LIMA1Q9UHB6 759 aaKnown RBP18.18■□□□□ 0.5
SNX22-207ENST00000561334 PCDHA4Q9UN74 947 aa18.18■□□□□ 0.5
SNX22-207ENST00000561334 M0R2N6 131 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 CALML3P27482 149 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 CCT6AP40227 531 aaKnown RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 KRT31Q15323 416 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 ZNF174Q15697 407 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 TTC31Q49AM3 519 aaPredicted RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 NCAPH2Q6IBW4 605 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 HEATR3Q7Z4Q2 680 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 DHX36Q9H2U1 1008 aaKnown RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 EIF3CLB5ME19 914 aaKnown RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 RNF225M0QZC1 329 aaPredicted RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 N4BP3O15049 544 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 RAD17O75943 681 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 TTLL1O95922 423 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 AARSP49588 968 aaKnown RBP eCLIP18.17■□□□□ 0.5
SNX22-207ENST00000561334 SHROOM1Q2M3G4 852 aaPredicted RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 CCDC148Q8NFR7 591 aa18.17■□□□□ 0.5
SNX22-207ENST00000561334 EIF3CQ99613 913 aaKnown RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 FRMPD2Q68DX3 1309 aaPredicted RBP18.17■□□□□ 0.5
SNX22-207ENST00000561334 SNHG28P0DPA3 235 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 TTC38Q5R3I4 469 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 RASGRP4Q8TDF6 673 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 SYMPKQ92797 1274 aaKnown RBP18.16■□□□□ 0.5
SNX22-207ENST00000561334 SLF1Q9BQI6 1058 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 UBA5Q9GZZ9 404 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 MPHOSPH10O00566 681 aaKnown RBP18.16■□□□□ 0.5
SNX22-207ENST00000561334 NPM3O75607 178 aaKnown RBP18.16■□□□□ 0.5
SNX22-207ENST00000561334 CDC25AP30304 524 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 TRIM14Q14142 442 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 DRC1Q96MC2 740 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 NUP88Q99567 741 aaPredicted RBP18.16■□□□□ 0.5
SNX22-207ENST00000561334 PI4KBQ9UBF8 816 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 CTNND2Q9UQB3 1225 aa18.16■□□□□ 0.5
SNX22-207ENST00000561334 PSMD14O00487 310 aa18.15■□□□□ 0.5
SNX22-207ENST00000561334 RNF40O75150 1001 aa18.15■□□□□ 0.5
SNX22-207ENST00000561334 RSBN1LQ6PCB5 846 aaPredicted RBP18.15■□□□□ 0.5
SNX22-207ENST00000561334 ZSCAN29Q8IWY8 852 aaPredicted RBP18.15■□□□□ 0.5
SNX22-207ENST00000561334 NCAPGQ9BPX3 1015 aa18.15■□□□□ 0.5
SNX22-207ENST00000561334 VAT1LQ9HCJ6 419 aa18.15■□□□□ 0.5
SNX22-207ENST00000561334 BRCA1P38398 1863 aaKnown RBP18.15■□□□□ 0.5
SNX22-207ENST00000561334 SYF2O95926 243 aaKnown RBP18.15■□□□□ 0.5
SNX22-207ENST00000561334 SMARCA1P28370 1054 aa18.15■□□□□ 0.5
SNX22-207ENST00000561334 USP14P54578 494 aa18.15■□□□□ 0.5
SNX22-207ENST00000561334 TRAPPC11Q7Z392 1133 aa18.15■□□□□ 0.5
SNX22-207ENST00000561334 MYCBPQ99417 103 aaPredicted RBP18.15■□□□□ 0.5
SNX22-207ENST00000561334 CORO7P57737 925 aa18.14■□□□□ 0.5
SNX22-207ENST00000561334 PIGSQ96S52 555 aa18.14■□□□□ 0.5
SNX22-207ENST00000561334 VPS16Q9H269 839 aa18.14■□□□□ 0.5
SNX22-207ENST00000561334 RIOX1Q9H6W3 641 aa18.14■□□□□ 0.5
SNX22-207ENST00000561334 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.5
SNX22-207ENST00000561334 PCDHA6Q9UN73 950 aa18.14■□□□□ 0.5
SNX22-207ENST00000561334 ATF5Q9Y2D1 282 aaPredicted RBP18.14■□□□□ 0.5
SNX22-207ENST00000561334 PCDHA8Q9Y5H6 950 aa18.14■□□□□ 0.5
SNX22-207ENST00000561334 VIL1P09327 827 aaKnown RBP18.14■□□□□ 0.49
SNX22-207ENST00000561334 KRT9P35527 623 aa18.14■□□□□ 0.49
SNX22-207ENST00000561334 TRAPPC10P48553 1259 aa18.14■□□□□ 0.49
SNX22-207ENST00000561334 COPB1P53618 953 aaKnown RBP18.14■□□□□ 0.49
SNX22-207ENST00000561334 SPAG1Q07617 926 aa18.14■□□□□ 0.49
SNX22-207ENST00000561334 PTGDRQ13258 359 aa18.14■□□□□ 0.49
SNX22-207ENST00000561334 DAGLBQ8NCG7 672 aa18.14■□□□□ 0.49
SNX22-207ENST00000561334 FERMT2Q96AC1 680 aa18.14■□□□□ 0.49
SNX22-207ENST00000561334 RRP36Q96EU6 259 aaKnown RBP18.14■□□□□ 0.49
SNX22-207ENST00000561334 EPN1Q9Y6I3 576 aaPredicted RBP18.14■□□□□ 0.49
SNX22-207ENST00000561334 PRPF6O94906 941 aaKnown RBP18.13■□□□□ 0.49
SNX22-207ENST00000561334 MCM3P25205 808 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 MMP14P50281 582 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 AFAP1L1Q8TED9 768 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 GMLQ99445 158 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 ZBTB12Q9Y330 459 aaPredicted RBP18.13■□□□□ 0.49
SNX22-207ENST00000561334 REXO2Q9Y3B8 237 aaKnown RBP18.13■□□□□ 0.49
SNX22-207ENST00000561334 COBLO75128 1261 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 PPFIA4O75335 1185 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 ATP2C1P98194 919 aaPredicted RBP18.13■□□□□ 0.49
SNX22-207ENST00000561334 MAP9Q49MG5 647 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 CCDC17Q96LX7 622 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 ZMYND12Q9H0C1 365 aa18.13■□□□□ 0.49
SNX22-207ENST00000561334 GUCA1BQ9UMX6 200 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms