RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 MEIS3P2A8K0S8 358 aa6.18□□□□□ -1.42
USP8-216ENST00000561206 DDX3XO00571 662 aaKnown RBP eCLIP6.18□□□□□ -1.42
USP8-216ENST00000561206 SORBS3O60504 671 aa6.18□□□□□ -1.42
USP8-216ENST00000561206 GBP2P32456 591 aaPredicted RBP6.18□□□□□ -1.42
USP8-216ENST00000561206 ITGA1P56199 1179 aa6.18□□□□□ -1.42
USP8-216ENST00000561206 FAM160A1Q05DH4 1040 aa6.18□□□□□ -1.42
USP8-216ENST00000561206 SLFN13Q68D06 897 aa6.18□□□□□ -1.42
USP8-216ENST00000561206 Q8TCH9 128 aa6.18□□□□□ -1.42
USP8-216ENST00000561206 DLL4Q9NR61 685 aa6.18□□□□□ -1.42
USP8-216ENST00000561206 RBM10P98175 930 aaKnown RBP6.17□□□□□ -1.42
USP8-216ENST00000561206 IGFL4Q6B9Z1 124 aa6.17□□□□□ -1.42
USP8-216ENST00000561206 ETV3LQ6ZN32 361 aa6.17□□□□□ -1.42
USP8-216ENST00000561206 SYT3Q9BQG1 590 aa6.17□□□□□ -1.42
USP8-216ENST00000561206 SUCOQ9UBS9 1254 aaKnown RBP6.17□□□□□ -1.42
USP8-216ENST00000561206 FHOD1Q9Y613 1164 aa6.17□□□□□ -1.42
USP8-216ENST00000561206 KRTAP15-1Q3LI76 137 aa6.16□□□□□ -1.42
USP8-216ENST00000561206 WWC2Q6AWC2 1192 aa6.16□□□□□ -1.42
USP8-216ENST00000561206 RCSD1Q6JBY9 416 aa6.16□□□□□ -1.42
USP8-216ENST00000561206 RNF207Q6ZRF8 634 aa6.16□□□□□ -1.42
USP8-216ENST00000561206 YTHDC1Q96MU7 727 aaKnown RBP6.16□□□□□ -1.42
USP8-216ENST00000561206 MRS2Q9HD23 443 aa6.16□□□□□ -1.42
USP8-216ENST00000561206 VTI1BQ9UEU0 232 aa6.16□□□□□ -1.42
USP8-216ENST00000561206 TLR3O15455 904 aaKnown RBP6.15□□□□□ -1.42
USP8-216ENST00000561206 GREM1O60565 184 aa6.15□□□□□ -1.42
USP8-216ENST00000561206 PPP1R11O60927 126 aaPredicted RBP6.15□□□□□ -1.42
USP8-216ENST00000561206 IFNGR1P15260 489 aa6.15□□□□□ -1.42
USP8-216ENST00000561206 ZNF445P59923 1031 aa6.15□□□□□ -1.42
USP8-216ENST00000561206 LRRFIP1Q32MZ4 808 aaKnown RBP6.15□□□□□ -1.42
USP8-216ENST00000561206 ERMP1Q7Z2K6 904 aa6.15□□□□□ -1.42
USP8-216ENST00000561206 REXO1Q8N1G1 1221 aaKnown RBP6.15□□□□□ -1.42
USP8-216ENST00000561206 USP33Q8TEY7 942 aa6.15□□□□□ -1.42
USP8-216ENST00000561206 DHRS1Q96LJ7 313 aa6.15□□□□□ -1.42
USP8-216ENST00000561206 MEGF9Q9H1U4 602 aa6.15□□□□□ -1.42
USP8-216ENST00000561206 C9IYK1 514 aa6.14□□□□□ -1.43
USP8-216ENST00000561206 NARSO43776 548 aaKnown RBP6.14□□□□□ -1.43
USP8-216ENST00000561206 ARHGEF18Q6ZSZ5 1173 aa6.14□□□□□ -1.43
USP8-216ENST00000561206 NAF1Q96HR8 494 aaKnown RBP6.14□□□□□ -1.43
USP8-216ENST00000561206 SLC9A7Q96T83 725 aa6.14□□□□□ -1.43
USP8-216ENST00000561206 TRIM8Q9BZR9 551 aa6.14□□□□□ -1.43
USP8-216ENST00000561206 KBTBD4Q9NVX7 518 aa6.14□□□□□ -1.43
USP8-216ENST00000561206 ZFR2Q9UPR6 939 aaKnown RBP6.14□□□□□ -1.43
USP8-216ENST00000561206 RWDD3Q9Y3V2 267 aa6.14□□□□□ -1.43
USP8-216ENST00000561206 MINDY4BA8MYZ0 360 aa6.13□□□□□ -1.43
USP8-216ENST00000561206 ZNF202O95125 648 aa6.13□□□□□ -1.43
USP8-216ENST00000561206 ATXN1P54253 815 aaKnown RBP6.13□□□□□ -1.43
USP8-216ENST00000561206 INHBCP55103 352 aa6.13□□□□□ -1.43
USP8-216ENST00000561206 TAGLNQ01995 201 aaKnown RBP6.13□□□□□ -1.43
USP8-216ENST00000561206 EEF1DP3Q658K8 133 aa6.13□□□□□ -1.43
USP8-216ENST00000561206 INTS3Q68E01 1043 aaKnown RBP6.13□□□□□ -1.43
USP8-216ENST00000561206 SMARCC1Q92922 1105 aaPredicted RBP6.13□□□□□ -1.43
USP8-216ENST00000561206 VOPP1Q96AW1 172 aa6.13□□□□□ -1.43
USP8-216ENST00000561206 GP6Q9HCN6 339 aa6.13□□□□□ -1.43
USP8-216ENST00000561206 SF3B6Q9Y3B4 125 aaKnown RBP6.13□□□□□ -1.43
USP8-216ENST00000561206 ITGAEP38570 1179 aa6.12□□□□□ -1.43
USP8-216ENST00000561206 FBXL19Q6PCT2 694 aa6.12□□□□□ -1.43
USP8-216ENST00000561206 ZC3H18Q86VM9 953 aaKnown RBP6.12□□□□□ -1.43
USP8-216ENST00000561206 DNAJC10Q8IXB1 793 aa6.12□□□□□ -1.43
USP8-216ENST00000561206 FAM26EQ8N5C1 309 aa6.12□□□□□ -1.43
USP8-216ENST00000561206 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.12□□□□□ -1.437e-9■■■■■ 28.8
USP8-216ENST00000561206 MCM7P33993 719 aa6.11□□□□□ -1.43
USP8-216ENST00000561206 PMS1P54277 932 aaKnown RBP6.11□□□□□ -1.43
USP8-216ENST00000561206 ADAM9Q13443 819 aa6.11□□□□□ -1.43
USP8-216ENST00000561206 PRKD1Q15139 912 aaPredicted RBP6.11□□□□□ -1.43
USP8-216ENST00000561206 KBTBD2Q8IY47 623 aa6.11□□□□□ -1.43
USP8-216ENST00000561206 CCDC144CPQ8IYA2 1237 aa6.11□□□□□ -1.43
USP8-216ENST00000561206 FIBCD1Q8N539 461 aa6.11□□□□□ -1.43
USP8-216ENST00000561206 PTPN18Q99952 460 aa6.11□□□□□ -1.43
USP8-216ENST00000561206 COPRSQ9NQ92 184 aa6.11□□□□□ -1.43
USP8-216ENST00000561206 SUPT16HQ9Y5B9 1047 aaKnown RBP6.11□□□□□ -1.43
USP8-216ENST00000561206 A0A087X1B8 175 aa6.1□□□□□ -1.43
USP8-216ENST00000561206 CYP1A1P04798 512 aaPredicted RBP6.1□□□□□ -1.43
USP8-216ENST00000561206 CD300LDQ6UXZ3 194 aa6.1□□□□□ -1.43
USP8-216ENST00000561206 DCP2Q8IU60 420 aaKnown RBP6.1□□□□□ -1.43
USP8-216ENST00000561206 SCUBE1Q8IWY4 988 aa6.1□□□□□ -1.43
USP8-216ENST00000561206 TMEM168Q9H0V1 697 aa6.1□□□□□ -1.43
USP8-216ENST00000561206 A0A087WZG4 1122 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 CD3EP07766 207 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 ERCC3P19447 782 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 EIF4A3P38919 411 aaKnown RBP6.09□□□□□ -1.43
USP8-216ENST00000561206 CRKP46108 304 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 CLCQ05315 142 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 HS1BP3Q53T59 392 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 NOL9Q5SY16 702 aaKnown RBP6.09□□□□□ -1.43
USP8-216ENST00000561206 STK32CQ86UX6 486 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 KLHL36Q8N4N3 616 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 BRF1Q92994 677 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 NGRNQ9NPE2 291 aaKnown RBP6.09□□□□□ -1.43
USP8-216ENST00000561206 SIT1Q9Y3P8 196 aa6.09□□□□□ -1.43
USP8-216ENST00000561206 PPFIA2O75334 1257 aa6.08□□□□□ -1.44
USP8-216ENST00000561206 CD247P20963 164 aa6.08□□□□□ -1.44
USP8-216ENST00000561206 IL13P35225 146 aa6.08□□□□□ -1.44
USP8-216ENST00000561206 DCAF15Q66K64 600 aa6.08□□□□□ -1.44
USP8-216ENST00000561206 FAM126BQ8IXS8 530 aa6.08□□□□□ -1.44
USP8-216ENST00000561206 JADE2Q9NQC1 790 aa6.08□□□□□ -1.44
USP8-216ENST00000561206 AURKAO14965 403 aa6.07□□□□□ -1.44
USP8-216ENST00000561206 AXDND1Q5T1B0 1012 aaPredicted RBP6.07□□□□□ -1.44
USP8-216ENST00000561206 PRAMEF18Q5VWM3 479 aa6.07□□□□□ -1.44
USP8-216ENST00000561206 PPFIBP1Q86W92 1011 aa6.07□□□□□ -1.44
USP8-216ENST00000561206 EDAQ92838 391 aa6.07□□□□□ -1.44
USP8-216ENST00000561206 L2HGDHQ9H9P8 463 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms