RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 COL25A1Q9BXS0 654 aaPredicted RBP31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 SUPT16HQ9Y5B9 1047 aaKnown RBP31.62■■■□□ 2.65
SNRPA1-215ENST00000561187 MYH6P13533 1939 aa31.61■■■□□ 2.65
SNRPA1-215ENST00000561187 PARP1P09874 1014 aaKnown RBP31.61■■■□□ 2.65
SNRPA1-215ENST00000561187 ASPRV1Q53RT3 343 aa31.61■■■□□ 2.65
SNRPA1-215ENST00000561187 COL20A1Q9P218 1284 aa31.61■■■□□ 2.65
SNRPA1-215ENST00000561187 CTNNA3Q9UI47 895 aa31.61■■■□□ 2.65
SNRPA1-215ENST00000561187 ABCB11O95342 1321 aa31.6■■■□□ 2.65
SNRPA1-215ENST00000561187 TXNP10599 105 aaKnown RBP31.6■■■□□ 2.65
SNRPA1-215ENST00000561187 TAAR1Q96RJ0 339 aa31.6■■■□□ 2.65
SNRPA1-215ENST00000561187 MTG1Q9BT17 334 aaPredicted RBP31.6■■■□□ 2.65
SNRPA1-215ENST00000561187 KRT23Q9C075 422 aa31.6■■■□□ 2.65
SNRPA1-215ENST00000561187 RAD50Q92878 1312 aa31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 MYO9BQ13459 2157 aa31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 FGBP02675 491 aa31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 IFIT1BQ5T764 474 aaKnown RBP31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 SEPT14Q6ZU15 432 aa31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 SYTL5Q8TDW5 730 aaPredicted RBP31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 HERVK_113Q902F9 699 aa31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 ANKS1AQ92625 1134 aa31.59■■■□□ 2.65
SNRPA1-215ENST00000561187 NBPF20Q3BBV1 942 aa31.58■■■□□ 2.65
SNRPA1-215ENST00000561187 TTC22Q5TAA0 569 aa31.58■■■□□ 2.65
SNRPA1-215ENST00000561187 CYB5R4Q7L1T6 521 aa31.58■■■□□ 2.65
SNRPA1-215ENST00000561187 STAG2Q8N3U4 1231 aa31.58■■■□□ 2.65
SNRPA1-215ENST00000561187 GBF1Q92538 1859 aa31.58■■■□□ 2.65
SNRPA1-215ENST00000561187 SCN10AQ9Y5Y9 1956 aa31.57■■■□□ 2.65
SNRPA1-215ENST00000561187 ZBBXA8MT70 800 aa31.57■■■□□ 2.64
SNRPA1-215ENST00000561187 TTLL4Q14679 1199 aa31.57■■■□□ 2.64
SNRPA1-215ENST00000561187 BRDTQ58F21 947 aaPredicted RBP31.57■■■□□ 2.64
SNRPA1-215ENST00000561187 FBXO11Q86XK2 927 aa31.57■■■□□ 2.64
SNRPA1-215ENST00000561187 USP38Q8NB14 1042 aa31.57■■■□□ 2.64
SNRPA1-215ENST00000561187 CNNM2Q9H8M5 875 aa31.57■■■□□ 2.64
SNRPA1-215ENST00000561187 JMJD4Q9H9V9 463 aa31.57■■■□□ 2.64
SNRPA1-215ENST00000561187 NKRFO15226 690 aaKnown RBP eCLIP31.56■■■□□ 2.64
SNRPA1-215ENST00000561187 CHST3Q7LGC8 479 aa31.56■■■□□ 2.64
SNRPA1-215ENST00000561187 DEFB128Q7Z7B8 93 aa31.56■■■□□ 2.64
SNRPA1-215ENST00000561187 SEZ6LQ9BYH1 1024 aa31.56■■■□□ 2.64
SNRPA1-215ENST00000561187 MTIF3Q9H2K0 278 aaKnown RBP31.56■■■□□ 2.64
SNRPA1-215ENST00000561187 NKX2-4Q9H2Z4 354 aa31.56■■■□□ 2.64
SNRPA1-215ENST00000561187 PRDM12Q9H4Q4 367 aa31.56■■■□□ 2.64
SNRPA1-215ENST00000561187 SCN5AQ14524 2016 aa31.55■■■□□ 2.64
SNRPA1-215ENST00000561187 B4DLN1 442 aa31.55■■■□□ 2.64
SNRPA1-215ENST00000561187 EIF2AK2P19525 551 aaKnown RBP31.55■■■□□ 2.64
SNRPA1-215ENST00000561187 MRPL12P52815 198 aaKnown RBP31.55■■■□□ 2.64
SNRPA1-215ENST00000561187 LY6KQ17RY6 165 aa31.55■■■□□ 2.64
SNRPA1-215ENST00000561187 CHD9Q3L8U1 2897 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 CFBP00751 764 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 NT5C2P49902 561 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 RABGGTBP53611 331 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 RGS22Q8NE09 1264 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 PPM1EQ8WY54 764 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 RMDN3Q96TC7 470 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 MSRAQ9UJ68 235 aa31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 YBX2Q9Y2T7 364 aaKnown RBP31.54■■■□□ 2.64
SNRPA1-215ENST00000561187 NSUN6Q8TEA1 469 aaKnown RBP31.53■■■□□ 2.64
SNRPA1-215ENST00000561187 AFG1LQ8WV93 481 aa31.53■■■□□ 2.64
SNRPA1-215ENST00000561187 MRPL11Q9Y3B7 192 aaKnown RBP31.53■■■□□ 2.64
SNRPA1-215ENST00000561187 A6NJR5 290 aa31.52■■■□□ 2.64
SNRPA1-215ENST00000561187 SUPT20HL2P0C7V6 817 aa31.52■■■□□ 2.64
SNRPA1-215ENST00000561187 PTH1RQ03431 593 aa31.52■■■□□ 2.64
SNRPA1-215ENST00000561187 ARHGEF16Q5VV41 709 aa31.52■■■□□ 2.64
SNRPA1-215ENST00000561187 MCF2L2Q86YR7 1114 aa31.52■■■□□ 2.64
SNRPA1-215ENST00000561187 VWCEQ96DN2 955 aa31.52■■■□□ 2.64
SNRPA1-215ENST00000561187 SEC23AQ15436 765 aa31.51■■■□□ 2.63
SNRPA1-215ENST00000561187 RAB30Q15771 203 aa31.51■■■□□ 2.63
SNRPA1-215ENST00000561187 HOMER1Q86YM7 354 aa31.51■■■□□ 2.63
SNRPA1-215ENST00000561187 TAF6LQ9Y6J9 622 aa31.51■■■□□ 2.63
SNRPA1-215ENST00000561187 KLRF2D3W0D1 207 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 SORBS3O60504 671 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 PPP1R11O60927 126 aaPredicted RBP31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 MMP3P08254 477 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 MYOGP15173 224 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 CCDC62Q6P9F0 684 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 RPUSD2Q8IZ73 545 aaKnown RBP31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 GAS2L1Q99501 681 aaPredicted RBP31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 SENP2Q9HC62 589 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 MAD2L2Q9UI95 211 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 NOD1Q9Y239 953 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 SLC4A7Q9Y6M7 1214 aa31.5■■■□□ 2.63
SNRPA1-215ENST00000561187 RBAK-RBAKDNI3L0D1 243 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 GH1P01241 217 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 ARHGAP1Q07960 439 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 TRDNQ13061 729 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 STXBP2Q15833 593 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 AMNQ9BXJ7 453 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 PRDM6Q9NQX0 595 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 SPTBN5Q9NRC6 3674 aaKnown RBP31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 KIAA1217Q5T5P2 1943 aa31.49■■■□□ 2.63
SNRPA1-215ENST00000561187 CHD7Q9P2D1 2997 aa31.48■■■□□ 2.63
SNRPA1-215ENST00000561187 OPLAHO14841 1288 aa31.48■■■□□ 2.63
SNRPA1-215ENST00000561187 CYP21A2P08686 494 aa31.48■■■□□ 2.63
SNRPA1-215ENST00000561187 NFRKBQ6P4R8 1299 aa31.48■■■□□ 2.63
SNRPA1-215ENST00000561187 PXMP2Q9NR77 195 aa31.48■■■□□ 2.63
SNRPA1-215ENST00000561187 TANC1Q9C0D5 1861 aa31.48■■■□□ 2.63
SNRPA1-215ENST00000561187 BAZ2BQ9UIF8 2168 aaKnown RBP31.47■■■□□ 2.63
SNRPA1-215ENST00000561187 KPNA6O60684 536 aa31.47■■■□□ 2.63
SNRPA1-215ENST00000561187 CHMLP26374 656 aa31.47■■■□□ 2.63
SNRPA1-215ENST00000561187 HOXA13P31271 388 aaPredicted RBP31.47■■■□□ 2.63
SNRPA1-215ENST00000561187 SLC28A3Q9HAS3 691 aa31.47■■■□□ 2.63
SNRPA1-215ENST00000561187 IFIT3O14879 490 aaKnown RBP31.46■■■□□ 2.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms