RNA–Protein interactions for RNA: ENST00000561071.5

MARK3-223, Transcript of microtubule affinity regulating kinase 3, human

TSL 3

Gene MARK3, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARK3-223	ENST00000561071	RSPO4	Q2I0M5	234 aa	Predicted RBP	9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	PROSER3	Q2NL68	480 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	NKAPL	Q5M9Q1	402 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	SLC51A	Q86UW1	340 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	YIPF2	Q9BWQ6	316 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	TAOK3	Q9H2K8	898 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	PNN	Q9H307	717 aa	Known RBP	9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	FBRS	Q9HAH7	460 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	CAPN10	Q9HC96	672 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	SSU72	Q9NP77	194 aa	Known RBP	9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	INPP5F	Q9Y2H2	1132 aa		9.19	□□□□□ -0.94
MARK3-223	ENST00000561071	KLRG2	A4D1S0	409 aa	Predicted RBP	9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	DDN	O94850	711 aa	Predicted RBP	9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	IGHA1	P01876	353 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	PGR	P06401	933 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	GJA8	P48165	433 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	FSTL1	Q12841	308 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	KRT24	Q2M2I5	525 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	SUSD4	Q5VX71	490 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	KIF6	Q6ZMV9	814 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	MAP3K15	Q6ZN16	1313 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	CLEC10A	Q8IUN9	316 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	SLITRK4	Q8IW52	837 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	GPRASP2	Q96D09	838 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	ABCC12	Q96J65	1359 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	FAM83C	Q9BQN1	747 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	C7orf69	Q9H7B7	122 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	STOML1	Q9UBI4	398 aa		9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	LAS1L	Q9Y4W2	734 aa	Known RBP	9.18	□□□□□ -0.94
MARK3-223	ENST00000561071	CACNA1S	Q13698	1873 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	KDM3B	Q7LBC6	1761 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	UBN2	Q6ZU65	1347 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	MYBBP1A	Q9BQG0	1328 aa	Known RBP	9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	ERVV-1	B6SEH8	477 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	MCM4	P33991	863 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	NKG7	Q16617	165 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	GK5	Q6ZS86	529 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	TINF2	Q9BSI4	451 aa		9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	ZNF277	Q9NRM2	450 aa	Predicted RBP	9.17	□□□□□ -0.94
MARK3-223	ENST00000561071	LTBP3	Q9NS15	1303 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	TCERG1	O14776	1098 aa	Known RBP	9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	FURIN	P09958	794 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	PLCG1	P19174	1290 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	CLC	Q05315	142 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	AIMP1	Q12904	312 aa	Known RBP	9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	MAP7	Q14244	749 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	CCDC93	Q567U6	631 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	SEZ6L2	Q6UXD5	910 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	CDC37L1	Q7L3B6	337 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	LRP10	Q7Z4F1	713 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	ZNF34	Q8IZ26	560 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	SMC1B	Q8NDV3	1235 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	ZNF507	Q8TCN5	953 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	GINM1	Q9NU53	330 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	PCOLCE2	Q9UKZ9	415 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	PCDHB14	Q9Y5E9	798 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	TACC3	Q9Y6A5	838 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	FER1L6	Q2WGJ9	1857 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	TIAM2	Q8IVF5	1701 aa		9.16	□□□□□ -0.94
MARK3-223	ENST00000561071	LAMB4	A4D0S4	1761 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	HTR3B	O95264	441 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	H2AFB1	P0C5Y9	115 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	H2AFB2	P0C5Z0	115 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	PDE4B	Q07343	736 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	WDR43	Q15061	677 aa	Known RBP eCLIP	9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	SOGA3	Q5TF21	947 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	PAOX	Q6QHF9	649 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	SYNE4	Q8N205	404 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	RASGRP4	Q8TDF6	673 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	RUNDC1	Q96C34	613 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	NYX	Q9GZU5	481 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	C1GALT1	Q9NS00	363 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	REV1	Q9UBZ9	1251 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	TJP2	Q9UDY2	1190 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	EFR3B	Q9Y2G0	817 aa		9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	TNRC6C	Q9HCJ0	1690 aa	Known RBP	9.15	□□□□□ -0.94
MARK3-223	ENST00000561071	ZNF541	Q9H0D2	1346 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	CHL1	O00533	1208 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	DYRK3	O43781	588 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	NTSR2	O95665	410 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	ALDH1B1	P30837	517 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	CDK5R2	Q13319	367 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	SLBP	Q14493	270 aa	Known RBP eCLIP	9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	CRY2	Q49AN0	593 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	COPS6	Q7L5N1	327 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	SHISA5	Q8N114	240 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	XAGE3	Q8WTP9	111 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	ACSF2	Q96CM8	615 aa	Predicted RBP	9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	PRKAG2	Q9UGJ0	569 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	NUP98	P52948	1817 aa		9.14	□□□□□ -0.95
MARK3-223	ENST00000561071	DNAJA2	O60884	412 aa		9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	ADM	P35318	185 aa		9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	ZNF165	P49910	485 aa		9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	LMOD3	Q0VAK6	560 aa		9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	HID1	Q8IV36	788 aa		9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	RTKN2	Q8IZC4	609 aa		9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	RPGR	Q92834	1020 aa	Known RBP	9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	DPH2	Q9BQC3	489 aa	Predicted RBP	9.13	□□□□□ -0.95
MARK3-223	ENST00000561071	WDR90	Q96KV7	1748 aa		9.13	□□□□□ -0.95

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