RNA–Protein interactions for RNA: ENST00000560944.1

CERS3-208, Transcript of ceramide synthase 3, human

TSL 3

Gene CERS3, Length 448 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CERS3-208	ENST00000560944	KIF22	Q14807	665 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	PRAMEF19	Q5SWL8	479 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	LARP1B	Q659C4	914 aa	Known RBP	12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	MCTP1	Q6DN14	999 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	FAM173B	Q6P4H8	233 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	EEPD1	Q7L9B9	569 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	DPP9	Q86TI2	863 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	REXO1	Q8N1G1	1221 aa	Known RBP	12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	DAGLB	Q8NCG7	672 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	IL27	Q8NEV9	243 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	LENG1	Q96BZ8	264 aa	Predicted RBP	12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	MAML3	Q96JK9	1138 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	RMDN3	Q96TC7	470 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	APBA2	Q99767	749 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	NUDT12	Q9BQG2	462 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	C6orf50	Q9HD87	102 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	PXMP2	Q9NR77	195 aa		12.91	□□□□□ -0.34
CERS3-208	ENST00000560944	FRMPD4	Q14CM0	1322 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	PIK3CD	O00329	1044 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	SORBS3	O60504	671 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	MYC	P01106	439 aa	Predicted RBP	12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	MYCL	P12524	364 aa	Predicted RBP	12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	RGS2	P41220	211 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	TRIM29	Q14134	588 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	INF2	Q27J81	1249 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	FOXD4L3	Q6VB84	417 aa	Predicted RBP	12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	PIK3AP1	Q6ZUJ8	805 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	MCF2L2	Q86YR7	1114 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	FBXO16	Q8IX29	292 aa	Predicted RBP	12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	ABRA	Q8N0Z2	381 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	RGS22	Q8NE09	1264 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	TRPV1	Q8NER1	839 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	CYP2W1	Q8TAV3	490 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	SH3TC2	Q8TF17	1288 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	CCDC12	Q8WUD4	166 aa	Predicted RBP	12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	SOCS4	Q8WXH5	440 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	ZDHHC9	Q9Y397	364 aa		12.9	□□□□□ -0.34
CERS3-208	ENST00000560944	DOCK5	Q9H7D0	1870 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944		H3BQV1	296 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	ADCY6	O43306	1168 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	ATP2B1	P20020	1258 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	DDIT3	P35638	169 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	MRPL12	P52815	198 aa	Known RBP	12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	MRPS9	P82933	396 aa	Known RBP	12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	REST	Q13127	1097 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	PGM5	Q15124	567 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	GJC2	Q5T442	439 aa	Predicted RBP	12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	IFFO2	Q5TF58	517 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	ARHGEF16	Q5VV41	709 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	ARMCX2	Q7L311	632 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	GJA10	Q969M2	543 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	PDCD2L	Q9BRP1	358 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	FTO	Q9C0B1	505 aa	Known RBP eCLIP	12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	PNMA2	Q9UL42	364 aa		12.89	□□□□□ -0.35
CERS3-208	ENST00000560944	SPDYE3	A6NKU9	549 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	STX6	O43752	255 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	STRN	O43815	780 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	ADCY3	O60266	1144 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	RGS20	O76081	388 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	TDP2	O95551	362 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	SNAI1	O95863	264 aa	Predicted RBP	12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	IGHA2	P01877	340 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	HOXC6	P09630	235 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	ANO1	Q5XXA6	986 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	RAET1E	Q8TD07	263 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	TBCK	Q8TEA7	893 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	KATNBL1	Q9H079	304 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	PDGFC	Q9NRA1	345 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	RTEL1	Q9NZ71	1219 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	PKD2L1	Q9P0L9	805 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	TELO2	Q9Y4R8	837 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	MYH15	Q9Y2K3	1946 aa		12.88	□□□□□ -0.35
CERS3-208	ENST00000560944	NR3C2	P08235	984 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	XBP1	P17861	261 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	EDNRB	P24530	442 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	GNA11	P29992	359 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	SREBF1	P36956	1147 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	TOB1	P50616	345 aa	Predicted RBP	12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	IRX5	P78411	483 aa	Predicted RBP	12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	ARHGAP4	P98171	946 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	TRAF1	Q13077	416 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	SEMA3F	Q13275	785 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	CTU1	Q7Z7A3	348 aa	Known RBP	12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	CRYGN	Q8WXF5	182 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	TINF2	Q9BSI4	451 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	BCAS3	Q9H6U6	928 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	ZHX1	Q9UKY1	873 aa	Predicted RBP	12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	PTPN22	Q9Y2R2	807 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	MRVI1	Q9Y6F6	885 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	KIAA1217	Q5T5P2	1943 aa		12.87	□□□□□ -0.35
CERS3-208	ENST00000560944	CCDC194	A0A1B0GVG4	234 aa		12.86	□□□□□ -0.35
CERS3-208	ENST00000560944	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	12.86	□□□□□ -0.35
CERS3-208	ENST00000560944	FAM86B1	E9PN63	330 aa		12.86	□□□□□ -0.35
CERS3-208	ENST00000560944	SLC37A4	O43826	429 aa		12.86	□□□□□ -0.35
CERS3-208	ENST00000560944	ARIH2	O95376	493 aa		12.86	□□□□□ -0.35
CERS3-208	ENST00000560944	INHA	P05111	366 aa		12.86	□□□□□ -0.35
CERS3-208	ENST00000560944	FAM86B2	P0C5J1	330 aa		12.86	□□□□□ -0.35
CERS3-208	ENST00000560944	ITGB5	P18084	799 aa		12.86	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms