RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 TNFAIP2Q03169 654 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 NTRK3Q16288 839 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 IWS1Q96ST2 819 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 HTATIP2Q9BUP3 242 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 ALDH8A1Q9H2A2 487 aaPredicted RBP17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 PXMP2Q9NR77 195 aa17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 SEC63Q9UGP8 760 aaKnown RBP17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 V9GY48 417 aaPredicted RBP17.64■□□□□ 0.41
SNRPA1-213ENST00000560856 ALPK3Q96L96 1907 aa17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 MEIS2O14770 477 aa17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 PDE4DQ08499 809 aa17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 TYW1BQ6NUM6 668 aa17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 PDCD2LQ9BRP1 358 aa17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 LARP6Q9BRS8 491 aaKnown RBP17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 PDRG1Q9NUG6 133 aa17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 NAP1L2Q9ULW6 460 aaPredicted RBP17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 PHF24Q9UPV7 400 aa17.63■□□□□ 0.41
SNRPA1-213ENST00000560856 CCDC196A0A1B0GTZ2 297 aa17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 PIK3CDO00329 1044 aa17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 NR3C2P08235 984 aa17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 EIF2AK2P19525 551 aaKnown RBP17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 CST5P28325 142 aaPredicted RBP17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 WWC2Q6AWC2 1192 aa17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 RNF180Q86T96 592 aa17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 IL31RAQ8NI17 732 aa17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 GPKOWQ92917 476 aaPredicted RBP eCLIP17.62■□□□□ 0.411e-20■■■■□ 20.3
SNRPA1-213ENST00000560856 ZNF274Q96GC6 653 aaPredicted RBP17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 SENP6Q9GZR1 1112 aaPredicted RBP17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 DNAH12Q6ZR08 3092 aa17.62■□□□□ 0.41
SNRPA1-213ENST00000560856 B4DLN1 442 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 KBTBD13C9JR72 458 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 MRPL12P52815 198 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 CCT2P78371 535 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 LRRC26Q2I0M4 334 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 DUSP28Q4G0W2 176 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 ARHGEF16Q5VV41 709 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 CCDC62Q6P9F0 684 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 USP17L6PQ6QN14 398 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 VSIG10LQ86VR7 867 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 FCHSD1Q86WN1 690 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 DPF3Q92784 378 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 TSEN34Q9BSV6 310 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 WDR11Q9BZH6 1224 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 NCOA5Q9HCD5 579 aaKnown RBP17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 Q9Y3F1 56 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 FRMPD4Q14CM0 1322 aa17.61■□□□□ 0.41
SNRPA1-213ENST00000560856 RGS20O76081 388 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 ARIH2O95376 493 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 PGM5Q15124 567 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 STXBP2Q15833 593 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 KCNA10Q16322 511 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 PKN1Q16512 942 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 HEATR3Q7Z4Q2 680 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 MPHOSPH6Q99547 160 aaKnown RBP17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 PSTPIP2Q9H939 334 aa17.6■□□□□ 0.41
SNRPA1-213ENST00000560856 STXBP3O00186 592 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 DYNC1LI2O43237 492 aaPredicted RBP17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 PRPF3O43395 683 aaKnown RBP17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 EIF3JO75822 258 aaKnown RBP17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 MYCNP04198 464 aaPredicted RBP17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 C6orf222P0C671 652 aaPredicted RBP17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 IFNAR1P17181 557 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 ACLYP53396 1101 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 SNX17Q15036 470 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 PFKFB3Q16875 520 aaPredicted RBP17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 TLK2Q86UE8 772 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 SCFD2Q8WU76 684 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 FERMT2Q96AC1 680 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 KIF2CQ99661 725 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 BARHL2Q9NY43 387 aa17.59■□□□□ 0.41
SNRPA1-213ENST00000560856 H0YGN5 161 aa17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 MRPS9P82933 396 aaKnown RBP17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 BEX3Q00994 111 aa17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 PRPF38BQ5VTL8 546 aaKnown RBP17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 SLC39A5Q6ZMH5 540 aa17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 NOL8Q76FK4 1167 aaKnown RBP17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 COPS5Q92905 334 aa17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 PHKBQ93100 1093 aa17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 TPCN1Q9ULQ1 816 aa17.58■□□□□ 0.4
SNRPA1-213ENST00000560856 A0A1W2PQ45 241 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 A0A1W2PQY0 241 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 MOXD2PA6NHM9 499 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 hCG_1984214I3L0E3 225 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 EVI5O60447 810 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 PPFIA3O75145 1194 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 MYCLP12524 364 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 SCG2P13521 617 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 ATN1P54259 1190 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 AK2P54819 239 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 UBE2SQ16763 222 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 GNASQ5JWF2 1037 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 C1orf53Q5VUE5 145 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 SEPT14Q6ZU15 432 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 ZNF713Q8N859 430 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 SMARCC2Q8TAQ2 1214 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 CUL5Q93034 780 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 RNF26Q9BY78 433 aaPredicted RBP17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 SPC25Q9HBM1 224 aa17.57■□□□□ 0.4
SNRPA1-213ENST00000560856 RIC8AQ9NPQ8 531 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms