RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 MRPL12P52815 198 aaKnown RBP21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 PTGISQ16647 500 aa21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 ALYREFQ86V81 257 aaKnown RBP21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 CAGE1Q8TC20 777 aa21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 AFAP1L1Q8TED9 768 aa21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 RANBP17Q9H2T7 1088 aaKnown RBP21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 C11orf16Q9NQ32 467 aa21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 MTUS1Q9ULD2 1270 aa21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 BRWD1Q9NSI6 2320 aa21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 MUC6Q6W4X9 2439 aa21.05■□□□□ 0.96
TSPAN3-208ENST00000560514 SSTR3P32745 418 aaPredicted RBP21.04■□□□□ 0.96
TSPAN3-208ENST00000560514 WDR5P61964 334 aaKnown RBP21.04■□□□□ 0.96
TSPAN3-208ENST00000560514 CSPP1Q1MSJ5 1256 aa21.04■□□□□ 0.96
TSPAN3-208ENST00000560514 RNF207Q6ZRF8 634 aa21.04■□□□□ 0.96
TSPAN3-208ENST00000560514 DCAF4Q8WV16 495 aa21.04■□□□□ 0.96
TSPAN3-208ENST00000560514 PNMA2Q9UL42 364 aa21.04■□□□□ 0.96
TSPAN3-208ENST00000560514 A6NJR5 290 aa21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 PRR33A8MZF0 331 aa21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 NFIBO00712 420 aa21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 RANBP6O60518 1105 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 PARNO95453 639 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 TXNP10599 105 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 SPRED2Q7Z698 418 aa21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 UIMC1Q96RL1 719 aa21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 TGS1Q96RS0 853 aaKnown RBP21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 UBE2ZQ9H832 354 aaPredicted RBP21.03■□□□□ 0.96
TSPAN3-208ENST00000560514 PTPRSQ13332 1948 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 LCHNA4D1U4 455 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 SLC16A2P36021 539 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 SYDE2Q5VT97 1194 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 TSHZ3Q63HK5 1081 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 CNKSR3Q6P9H4 555 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 RASGRP2Q7LDG7 609 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 GJD3Q8N144 294 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 COPS5Q92905 334 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 RAD9AQ99638 391 aa21.02■□□□□ 0.96
TSPAN3-208ENST00000560514 PIEZO1Q92508 2521 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 NMT2O60551 498 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 ALADP13716 330 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 SELPP16109 830 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 SLC30A10Q6XR72 485 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 LRRC8DQ7L1W4 858 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 TMCO2Q7Z6W1 182 aaPredicted RBP21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 DNERQ8NFT8 737 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 SUGCTQ9HAC7 445 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 CD320Q9NPF0 282 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 IL17RBQ9NRM6 502 aa21.01■□□□□ 0.95
TSPAN3-208ENST00000560514 KCNA5P22460 613 aa21■□□□□ 0.95
TSPAN3-208ENST00000560514 LEXMQ3ZCV2 418 aa21■□□□□ 0.95
TSPAN3-208ENST00000560514 TTBK2Q6IQ55 1244 aa21■□□□□ 0.95
TSPAN3-208ENST00000560514 FAM178BQ8IXR5 827 aa21■□□□□ 0.95
TSPAN3-208ENST00000560514 SEC62Q99442 399 aaKnown RBP21■□□□□ 0.95
TSPAN3-208ENST00000560514 ABHD14A-ACY1A0A1B0GW23 586 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 EFCAB14O75071 495 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 GJB5O95377 273 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 ERVK-21P61565 698 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 RPS6P62753 249 aaKnown RBP20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 DEFB103AP81534 67 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 CTDSPL2Q05D32 466 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 BTNL9Q6UXG8 535 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 FSD1Q9BTV5 496 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 TOMM22Q9NS69 142 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 FRMPD2Q68DX3 1309 aaPredicted RBP20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 SIP14410 1827 aa20.99■□□□□ 0.95
TSPAN3-208ENST00000560514 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.98■□□□□ 0.95
TSPAN3-208ENST00000560514 IKBKEQ14164 716 aa20.98■□□□□ 0.95
TSPAN3-208ENST00000560514 GDF6Q6KF10 455 aaPredicted RBP20.98■□□□□ 0.95
TSPAN3-208ENST00000560514 GPCPD1Q9NPB8 672 aa20.98■□□□□ 0.95
TSPAN3-208ENST00000560514 CASTP20810 708 aaKnown RBP20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 EDNRBP24530 442 aa20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 PUS10Q3MIT2 529 aaKnown RBP20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 PTCRAQ6ISU1 281 aaPredicted RBP20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 FAM117BQ6P1L5 589 aa20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 SESTD1Q86VW0 696 aa20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 AFG1LQ8WV93 481 aa20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 CLEC4DQ8WXI8 215 aa20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 INCENPQ9NQS7 918 aa20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 CTNNA3Q9UI47 895 aa20.97■□□□□ 0.95
TSPAN3-208ENST00000560514 LINC01553A4QN01 128 aa20.96■□□□□ 0.95
TSPAN3-208ENST00000560514 GH1P01241 217 aa20.96■□□□□ 0.95
TSPAN3-208ENST00000560514 TOP1P11387 765 aaKnown RBP20.96■□□□□ 0.95
TSPAN3-208ENST00000560514 IL9P15248 144 aa20.96■□□□□ 0.95
TSPAN3-208ENST00000560514 C7orf31Q8N865 590 aa20.96■□□□□ 0.95
TSPAN3-208ENST00000560514 FBXO22Q8NEZ5 403 aa20.96■□□□□ 0.95
TSPAN3-208ENST00000560514 CXCL10P02778 98 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 MMP3P08254 477 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 CKBP12277 381 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 PTPROQ16827 1216 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 ZMYM1Q5SVZ6 1142 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 CHST3Q7LGC8 479 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 FAM50BQ9Y247 325 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 INSL6Q9Y581 213 aa20.95■□□□□ 0.94
TSPAN3-208ENST00000560514 NBNO60934 754 aa20.94■□□□□ 0.94
TSPAN3-208ENST00000560514 ARIH2O95376 493 aa20.94■□□□□ 0.94
TSPAN3-208ENST00000560514 MRE11P49959 708 aa20.94■□□□□ 0.94
TSPAN3-208ENST00000560514 RRP12Q5JTH9 1297 aaKnown RBP20.94■□□□□ 0.94
TSPAN3-208ENST00000560514 SEPT14Q6ZU15 432 aa20.94■□□□□ 0.94
TSPAN3-208ENST00000560514 KATNAL1Q9BW62 490 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms