RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 KINO60870 393 aaKnown RBP9.76□□□□□ -0.85
TRAF3-209ENST00000560463 NR1I2O75469 434 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 SLC25A27O95847 323 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 OR52Z1P0C646 297 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 LIG1P18858 919 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 HOXA13P31271 388 aaPredicted RBP9.76□□□□□ -0.85
TRAF3-209ENST00000560463 CIITAP33076 1130 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 SNW1Q13573 536 aaKnown RBP9.76□□□□□ -0.85
TRAF3-209ENST00000560463 PDIA5Q14554 519 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 CCL15Q16663 113 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 Q4G0T1 1027 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 MUM1L1Q5H9M0 696 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 GPAT2Q6NUI2 795 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 SHC4Q6S5L8 630 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 RNF207Q6ZRF8 634 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.85
TRAF3-209ENST00000560463 ANKRD23Q86SG2 305 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 RIOX2Q8IUF8 465 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 FMR1NBQ8N0W7 255 aaPredicted RBP9.76□□□□□ -0.85
TRAF3-209ENST00000560463 TIGD1Q96MW7 591 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 CLIC6Q96NY7 704 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 P2RX7Q99572 595 aaKnown RBP9.76□□□□□ -0.85
TRAF3-209ENST00000560463 RAB34Q9BZG1 259 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 NUP62CLQ9H1M0 184 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 RNF146Q9NTX7 359 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 DACT1Q9NYF0 836 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 DDX25Q9UHL0 483 aaKnown RBP9.76□□□□□ -0.85
TRAF3-209ENST00000560463 HPSEQ9Y251 543 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 FRMPD4Q14CM0 1322 aa9.76□□□□□ -0.85
TRAF3-209ENST00000560463 TESPA1A2RU30 521 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-209ENST00000560463 VWA3AA6NCI4 1184 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 NFIBO00712 420 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 EDIL3O43854 480 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 TOMM70O94826 608 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 ZNF202O95125 648 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 PFKFB1P16118 471 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 TXLNAP40222 546 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 FXR2P51116 673 aaKnown RBP eCLIP9.75□□□□□ -0.85
TRAF3-209ENST00000560463 INHBEP58166 350 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 PLS1Q14651 629 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 CALCRLQ16602 461 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 TMEM266Q2M3C6 531 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 ZSCAN23Q3MJ62 389 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 TPRNQ4KMQ1 711 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 RGMBQ6NW40 437 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 KANK3Q6NY19 840 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 XRRA1Q6P2D8 792 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 SAPCD2Q86UD0 394 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 FCHSD1Q86WN1 690 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 ELOA2Q8IYF1 753 aaPredicted RBP9.75□□□□□ -0.85
TRAF3-209ENST00000560463 SLFN12Q8IYM2 578 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 TBC1D5Q92609 795 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 CCDC34Q96HJ3 373 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 HHIPL1Q96JK4 782 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 MTMR9Q96QG7 549 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 SPATC1LQ9H0A9 340 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 CSRNP2Q9H175 543 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 GOLPH3LQ9H4A5 285 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 CLSTN2Q9H4D0 955 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 ZCCHC17Q9NP64 241 aaKnown RBP9.75□□□□□ -0.85
TRAF3-209ENST00000560463 HOMER2Q9NSB8 354 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 USP25Q9UHP3 1055 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 CASP8AP2Q9UKL3 1982 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 PFASO15067 1338 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 RPTORQ8N122 1335 aa9.75□□□□□ -0.85
TRAF3-209ENST00000560463 MANSC4A6NHS7 340 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 TDP2O95551 362 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 TAL1P17542 331 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 ZNF76P36508 570 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 SYKP43405 635 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 GCLCP48506 637 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 ZNF157P51786 506 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 NDUFA8P51970 172 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 ZNF445P59923 1031 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 RPS6P62753 249 aaKnown RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 FSTL1Q12841 308 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 PCNX4Q63HM2 1172 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 RBM43Q6ZSC3 357 aaKnown RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 NIPA1Q7RTP0 329 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 POTEDQ86YR6 584 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 IGSF22Q8N9C0 903 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 SHCBP1Q8NEM2 672 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 FAM20AQ96MK3 541 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 GZF1Q9H116 711 aaPredicted RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 TMEM60Q9H2L4 133 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 TNMDQ9H2S6 317 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 MROH8Q9H579 483 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 KCNMB3Q9NPA1 279 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 BTBD7Q9P203 1132 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 HOOK1Q9UJC3 728 aaKnown RBP9.74□□□□□ -0.85
TRAF3-209ENST00000560463 KCNH3Q9ULD8 1083 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 RIPK3Q9Y572 518 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 STK24Q9Y6E0 443 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 MRVI1Q9Y6F6 885 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 TLL2Q9Y6L7 1015 aa9.74□□□□□ -0.85
TRAF3-209ENST00000560463 BTBD19C9JJ37 291 aa9.73□□□□□ -0.85
TRAF3-209ENST00000560463 PDHXO00330 501 aa9.73□□□□□ -0.85
TRAF3-209ENST00000560463 SLC26A4O43511 780 aa9.73□□□□□ -0.85
TRAF3-209ENST00000560463 SLC37A4O43826 429 aa9.73□□□□□ -0.85
TRAF3-209ENST00000560463 MARCH6O60337 910 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms