RNA–Protein interactions for RNA: ENST00000560433.5

SNRPA1-211, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-211ENST00000560433 PURBQ96QR8 312 aaKnown RBP12.27□□□□□ -0.45
SNRPA1-211ENST00000560433 VGLL4Q14135 290 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 MUM1L1Q5H9M0 696 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 NT5DC1Q5TFE4 455 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 DRC7Q8IY82 874 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 MED15Q96RN5 788 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 PCDHA12Q9UN75 941 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 POTEIP0CG38 1075 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 POTEJP0CG39 1038 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 ZNF76P36508 570 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 SUPT20HL1Q3ZLR7 823 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 SPATA20Q8TB22 786 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 SNX29Q8TEQ0 813 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 LPAR1Q92633 364 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 CCSER1Q9C0I3 900 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 HSD3B7Q9H2F3 369 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 FANCLQ9NW38 375 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 CCDC39Q9UFE4 941 aa12.26□□□□□ -0.45
SNRPA1-211ENST00000560433 DOCK1Q14185 1865 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 GCOM1H8Y6P7 765 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 CAVIN2O95810 425 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 POLR2MP0CAP2 368 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 ZNF75DP51815 510 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 GRB10Q13322 594 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 AP3B2Q13367 1082 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 TMEM266Q2M3C6 531 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 KCNK18Q7Z418 384 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 CRYGNQ8WXF5 182 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 CLMNQ96JQ2 1002 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 COL20A1Q9P218 1284 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 GDAQ9Y2T3 454 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 RIPK3Q9Y572 518 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 SMC2O95347 1197 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 ICAM1P05362 532 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 EPHX2P34913 555 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 TTLL12Q14166 644 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 PLA2G4DQ86XP0 818 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 ELOA2Q8IYF1 753 aaPredicted RBP12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 HPS3Q969F9 1004 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 PNMA5Q96PV4 448 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 GLT8D2Q9H1C3 349 aa12.25□□□□□ -0.45
SNRPA1-211ENST00000560433 SREBF1P36956 1147 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 FXR2P51116 673 aaKnown RBP eCLIP12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 USP11P51784 963 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 MCM6Q14566 821 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 LENG9Q96B70 501 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 AK8Q96MA6 479 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 ELP3Q9H9T3 547 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 AS3MTQ9HBK9 375 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 SLC38A10Q9HBR0 1119 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 PKD2L1Q9P0L9 805 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 PPP1R9AQ9ULJ8 1098 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 MRPL11Q9Y3B7 192 aaKnown RBP12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 CTDP1Q9Y5B0 961 aaPredicted RBP12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 CENPFP49454 3210 aa12.24□□□□□ -0.45
SNRPA1-211ENST00000560433 PLA2G6O60733 806 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 RPN1P04843 607 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 DYMQ7RTS9 669 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 CALML4Q96GE6 196 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 CCDC34Q96HJ3 373 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 WDR18Q9BV38 432 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 AFG3L2Q9Y4W6 797 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 SNCAIPQ9Y6H5 919 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 ABCB11O95342 1321 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 ESPNB1AK53 854 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 VWA5AO00534 786 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 MSH4O15457 936 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 GTPBP6O43824 516 aaPredicted RBP12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 USP14P54578 494 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 MYL5Q02045 173 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 PLS1Q14651 629 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 NCAPH2Q6IBW4 605 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 CLEC4DQ8WXI8 215 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 CDK5RAP3Q96JB5 506 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 BPIFA3Q9BQP9 254 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 ZNF408Q9H9D4 720 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 KCNMB3Q9NPA1 279 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 SAMSN1Q9NSI8 373 aaKnown RBP12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 BLOC1S4Q9NUP1 217 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 IFNKQ9P0W0 207 aa12.23□□□□□ -0.45
SNRPA1-211ENST00000560433 POTEB3A0JP26 581 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 POTECB2RU33 542 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 E9PMD0 336 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 PIK3CDO00329 1044 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 MEIS1O00470 390 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CHMP2AO43633 222 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 FOSP01100 380 aaPredicted RBP12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 SSBP05455 408 aaKnown RBP eCLIP12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 GCFC2P16383 781 aaKnown RBP12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 RAD51AP2Q09MP3 1159 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 CCDC144BQ3MJ40 725 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 KMT5BQ4FZB7 885 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 TREML2Q5T2D2 321 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 KRT79Q5XKE5 535 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 POTEBQ6S5H4 581 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 NSMFQ6X4W1 530 aa12.22□□□□□ -0.45
SNRPA1-211ENST00000560433 IL31RAQ8NI17 732 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms