RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ADHFE1Q8IWW8 467 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 LRRC47Q8N1G4 583 aaKnown RBP11□□□□□ -0.65
SMAD3-215ENST00000560424 NEK9Q8TD19 979 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 PPP1R13LQ8WUF5 828 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 MRPL38Q96DV4 380 aaKnown RBP11□□□□□ -0.65
SMAD3-215ENST00000560424 PHOX2BQ99453 314 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 GNL3Q9BVP2 549 aaKnown RBP eCLIP11□□□□□ -0.65
SMAD3-215ENST00000560424 CYP39A1Q9NYL5 469 aa11□□□□□ -0.65
SMAD3-215ENST00000560424 DDX49Q9Y6V7 483 aaKnown RBP11□□□□□ -0.65
SMAD3-215ENST00000560424 ABHD14A-ACY1A0A1B0GW23 586 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 NKRFO15226 690 aaKnown RBP eCLIP10.99□□□□□ -0.65
SMAD3-215ENST00000560424 SELPP16109 830 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 PPP2R5BQ15173 497 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 PKN1Q16512 942 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 TMEM63BQ5T3F8 832 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 ZSCAN25Q6NSZ9 544 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 BANK1Q8NDB2 785 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 GMCL1P1Q8NEA9 526 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 PABPC5Q96DU9 382 aaKnown RBP10.99□□□□□ -0.65
SMAD3-215ENST00000560424 CLDND1Q9NY35 253 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 SYNPO2Q9UMS6 1093 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 INSL6Q9Y581 213 aa10.99□□□□□ -0.65
SMAD3-215ENST00000560424 PTPRSQ13332 1948 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 GREB1LQ9C091 1923 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-215ENST00000560424 SLC1A4P43007 532 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 ALDH5A1P51649 535 aaPredicted RBP10.98□□□□□ -0.65
SMAD3-215ENST00000560424 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 STAG1Q8WVM7 1258 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 ANKS1AQ92625 1134 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 PBXIP1Q96AQ6 731 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 CHMP4CQ96CF2 233 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 CEP95Q96GE4 821 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 SAMD11Q96NU1 681 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 C17orf80Q9BSJ5 609 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 NSUN3Q9H649 340 aaKnown RBP10.98□□□□□ -0.65
SMAD3-215ENST00000560424 MUTYHQ9UIF7 546 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 CCPG1Q9ULG6 757 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 WDFY4Q6ZS81 3184 aa10.98□□□□□ -0.65
SMAD3-215ENST00000560424 TET1Q8NFU7 2136 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 PTPDC1A2A3K4 754 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 NCK2O43639 380 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 AMHP03971 560 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 TSPY3P0CV98 308 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 TSPY8P0CW00 308 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 IRS1P35568 1242 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 PDE4BQ07343 736 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 PDE4DQ08499 809 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 UBE3CQ15386 1083 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 TCEAL5Q5H9L2 206 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 MUM1L1Q5H9M0 696 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 CHD1LQ86WJ1 897 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 MYOCDQ8IZQ8 938 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 PRSS33Q8NF86 280 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 RHPN1Q8TCX5 695 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 MKL1Q969V6 931 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 IRF2BPLQ9H1B7 796 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 BOLA2Q9H3K6 86 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 MTMR4Q9NYA4 1195 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 TRIP12Q14669 1992 aaPredicted RBP10.97□□□□□ -0.65
SMAD3-215ENST00000560424 SCN10AQ9Y5Y9 1956 aa10.97□□□□□ -0.65
SMAD3-215ENST00000560424 ZNF318Q5VUA4 2279 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 LOC102724159A0A0B4J2E5 919 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 C19orf67A6NJJ6 358 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 B4DLN1 442 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 PRDM1O75626 825 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 TDO2P48775 406 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 MRPL12P52815 198 aaKnown RBP10.96□□□□□ -0.65
SMAD3-215ENST00000560424 GPM6BQ13491 265 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 PWP2Q15269 919 aaKnown RBP10.96□□□□□ -0.65
SMAD3-215ENST00000560424 SBK1Q52WX2 424 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 HERC4Q5GLZ8 1057 aaPredicted RBP10.96□□□□□ -0.65
SMAD3-215ENST00000560424 PPP4R3BQ5MIZ7 849 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 RNF135Q8IUD6 432 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 MORC4Q8TE76 937 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 SCFD2Q8WU76 684 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 EDAQ92838 391 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 KIF1BPQ96EK5 621 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 YME1L1Q96TA2 773 aa10.96□□□□□ -0.65
SMAD3-215ENST00000560424 A6NJR5 290 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 CXCL10P02778 98 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 APPP05067 770 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 TXNP10599 105 aaKnown RBP10.95□□□□□ -0.66
SMAD3-215ENST00000560424 CKBP12277 381 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 MCCP23508 829 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 CALML3P27482 149 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 SNAP25P60880 206 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 BAATQ14032 418 aaPredicted RBP10.95□□□□□ -0.66
SMAD3-215ENST00000560424 CLUL1Q15846 466 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 EPC2Q52LR7 807 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 RPAINQ86UA6 219 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 C7orf31Q8N865 590 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 GMCL1Q96IK5 515 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 PURBQ96QR8 312 aaKnown RBP10.95□□□□□ -0.66
SMAD3-215ENST00000560424 PUS7LQ9H0K6 701 aaKnown RBP10.95□□□□□ -0.66
SMAD3-215ENST00000560424 MTMR7Q9Y216 660 aa10.95□□□□□ -0.66
SMAD3-215ENST00000560424 IGKV6D-41A0A0C4DH26 115 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 RBM47A0AV96 593 aaKnown RBP10.94□□□□□ -0.66
SMAD3-215ENST00000560424 TMEM221A6NGB7 291 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 H3BNC9 293 aa10.94□□□□□ -0.66
SMAD3-215ENST00000560424 M0R296 226 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms