RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 GRM4Q14833 912 aa17.12■□□□□ 0.33
IDH3A-219ENST00000560414 SART3Q15020 963 aaKnown RBP17.12■□□□□ 0.33
IDH3A-219ENST00000560414 NECTIN1Q15223 517 aa17.12■□□□□ 0.33
IDH3A-219ENST00000560414 SLC35G1Q2M3R5 365 aa17.12■□□□□ 0.33
IDH3A-219ENST00000560414 CREB3L3Q68CJ9 461 aa17.12■□□□□ 0.33
IDH3A-219ENST00000560414 FBXO11Q86XK2 927 aa17.12■□□□□ 0.33
IDH3A-219ENST00000560414 UPF3AQ9H1J1 476 aaKnown RBP17.12■□□□□ 0.33
IDH3A-219ENST00000560414 SPC25Q9HBM1 224 aa17.12■□□□□ 0.33
IDH3A-219ENST00000560414 GNEQ9Y223 722 aaKnown RBP17.12■□□□□ 0.33
IDH3A-219ENST00000560414 MOXD2PA6NHM9 499 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 ASGR1P07306 291 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 CST5P28325 142 aaPredicted RBP17.11■□□□□ 0.33
IDH3A-219ENST00000560414 TLE2Q04725 743 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 TROAPQ12815 778 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 GNASQ5JWF2 1037 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 SH3RF1Q7Z6J0 888 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 PRDM5Q9NQX1 630 aaPredicted RBP17.11■□□□□ 0.33
IDH3A-219ENST00000560414 STARD7Q9NQZ5 370 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 ABCB11O95342 1321 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 LAMA3Q16787 3333 aa17.11■□□□□ 0.33
IDH3A-219ENST00000560414 DYNC1LI2O43237 492 aaPredicted RBP17.1■□□□□ 0.33
IDH3A-219ENST00000560414 PRC1O43663 620 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 PPP1R11O60927 126 aaPredicted RBP17.1■□□□□ 0.33
IDH3A-219ENST00000560414 C1orf53Q5VUE5 145 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 IQSEC1Q6DN90 963 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 TLK2Q86UE8 772 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 RGS22Q8NE09 1264 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 NUP133Q8WUM0 1156 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 UBE2OQ9C0C9 1292 aaKnown RBP17.1■□□□□ 0.33
IDH3A-219ENST00000560414 LY9Q9HBG7 655 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 PRKAG2Q9UGJ0 569 aa17.1■□□□□ 0.33
IDH3A-219ENST00000560414 SZT2Q5T011 3432 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 PQBP1O60828 265 aaKnown RBP17.09■□□□□ 0.33
IDH3A-219ENST00000560414 CDC45O75419 566 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 PDE4DQ08499 809 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 SMYD5Q6GMV2 418 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 CASC1Q6TDU7 716 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 CATIPQ7Z7H3 387 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 HOMER1Q86YM7 354 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 PCSK9Q8NBP7 692 aaKnown RBP17.09■□□□□ 0.33
IDH3A-219ENST00000560414 DNERQ8NFT8 737 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 SYTL5Q8TDW5 730 aaPredicted RBP17.09■□□□□ 0.33
IDH3A-219ENST00000560414 VTI1AQ96AJ9 217 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 TAAR1Q96RJ0 339 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 PIGSQ96S52 555 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 AMNQ9BXJ7 453 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 PDLIM7Q9NR12 457 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 COL20A1Q9P218 1284 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 MRPL11Q9Y3B7 192 aaKnown RBP17.09■□□□□ 0.33
IDH3A-219ENST00000560414 LRRC37A2A6NM11 1700 aa17.09■□□□□ 0.33
IDH3A-219ENST00000560414 BAZ2BQ9UIF8 2168 aaKnown RBP17.09■□□□□ 0.33
IDH3A-219ENST00000560414 LOC102724159A0A0B4J2E5 919 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 A0A1W2PPC1 479 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 TRIM43BA6NCK2 446 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 SOX1O00570 391 aaPredicted RBP17.08■□□□□ 0.32
IDH3A-219ENST00000560414 OPLAHO14841 1288 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 ZBTB5O15062 677 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 CYTH3O43739 400 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 EDNRBP24530 442 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 MCM5P33992 734 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 NKX3-2P78367 333 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 PWP2Q15269 919 aaKnown RBP17.08■□□□□ 0.32
IDH3A-219ENST00000560414 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.32
IDH3A-219ENST00000560414 GLT1D1Q96MS3 346 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 LBHD1Q9BQE6 289 aaPredicted RBP17.08■□□□□ 0.32
IDH3A-219ENST00000560414 LRRC2Q9BYS8 371 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 WDR11Q9BZH6 1224 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 AP5M1Q9H0R1 490 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 RIOX1Q9H6W3 641 aa17.08■□□□□ 0.32
IDH3A-219ENST00000560414 SH2B2O14492 632 aaPredicted RBP17.07■□□□□ 0.32
IDH3A-219ENST00000560414 CFBP00751 764 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 NEFLP07196 543 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 FSCN1Q16658 493 aaKnown RBP17.07■□□□□ 0.32
IDH3A-219ENST00000560414 DUSP28Q4G0W2 176 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 CXCL17Q6UXB2 119 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 MCF2L2Q86YR7 1114 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 PIBF1Q8WXW3 757 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 PCDHA1Q9Y5I3 950 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 MYH6P13533 1939 aa17.07■□□□□ 0.32
IDH3A-219ENST00000560414 ELP1O95163 1332 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 RBM47A0AV96 593 aaKnown RBP17.06■□□□□ 0.32
IDH3A-219ENST00000560414 CLTBP09497 229 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 ITGB8P26012 769 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 TPRNQ4KMQ1 711 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 NFXL1Q6ZNB6 911 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 RAB11FIP4Q86YS3 637 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 TDHQ8IZJ6 230 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 BADQ92934 168 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 RMDN3Q96TC7 470 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 MPHOSPH6Q99547 160 aaKnown RBP17.06■□□□□ 0.32
IDH3A-219ENST00000560414 Q9Y3F1 56 aa17.06■□□□□ 0.32
IDH3A-219ENST00000560414 RXRAP19793 462 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 MLLT3P42568 568 aaPredicted RBP17.05■□□□□ 0.32
IDH3A-219ENST00000560414 CDK7P50613 346 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 FAAP100Q0VG06 881 aa17.05■□□□□ 0.32
IDH3A-219ENST00000560414 ANKRD33Q7Z3H0 272 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms