RNA–Protein interactions for RNA: ENST00000560175.5

SMAD3-213, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 542 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-213ENST00000560175 NKRFO15226 690 aaKnown RBP eCLIP15.3■□□□□ 0.045e-6■□□□□ 8.8
SMAD3-213ENST00000560175 CFBP00751 764 aa15.3■□□□□ 0.04
SMAD3-213ENST00000560175 C6orf222P0C671 652 aaPredicted RBP15.3■□□□□ 0.04
SMAD3-213ENST00000560175 PDE4DQ08499 809 aa15.3■□□□□ 0.04
SMAD3-213ENST00000560175 GNASQ5JWF2 1037 aa15.3■□□□□ 0.04
SMAD3-213ENST00000560175 TMTC3Q6ZXV5 915 aa15.3■□□□□ 0.04
SMAD3-213ENST00000560175 TLK2Q86UE8 772 aa15.3■□□□□ 0.04
SMAD3-213ENST00000560175 SLC43A3Q8NBI5 491 aa15.3■□□□□ 0.04
SMAD3-213ENST00000560175 RRP36Q96EU6 259 aaKnown RBP15.3■□□□□ 0.04
SMAD3-213ENST00000560175 PXMP2Q9NR77 195 aa15.3■□□□□ 0.04
SMAD3-213ENST00000560175 FAM217BQ9NTX9 383 aaPredicted RBP15.3■□□□□ 0.04
SMAD3-213ENST00000560175 RBM27Q9P2N5 1060 aaKnown RBP15.3■□□□□ 0.04
SMAD3-213ENST00000560175 FRMPD4Q14CM0 1322 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 PIK3CDO00329 1044 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 DYNC1LI2O43237 492 aaPredicted RBP15.29■□□□□ 0.04
SMAD3-213ENST00000560175 NR3C2P08235 984 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 RXRAP19793 462 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 EVCP57679 992 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 PPP2R5BQ15173 497 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 STXBP2Q15833 593 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 CHRDL2Q6WN34 429 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 VSIG10LQ86VR7 867 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 SCFD2Q8WU76 684 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 TCEANC2Q96MN5 208 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 PDCD2LQ9BRP1 358 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 RBM28Q9NW13 759 aaKnown RBP15.29■□□□□ 0.04
SMAD3-213ENST00000560175 ZMYND8Q9ULU4 1186 aaPredicted RBP15.29■□□□□ 0.04
SMAD3-213ENST00000560175 LAMA3Q16787 3333 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 LTBP2Q14767 1821 aa15.29■□□□□ 0.04
SMAD3-213ENST00000560175 NID2Q14112 1375 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 GCOM1H8Y6P7 765 aaPredicted RBP15.28■□□□□ 0.04
SMAD3-213ENST00000560175 EIF3JO75822 258 aaKnown RBP15.28■□□□□ 0.04
SMAD3-213ENST00000560175 CABYRO75952 493 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 MYCNP04198 464 aaPredicted RBP15.28■□□□□ 0.04
SMAD3-213ENST00000560175 POLR2MP0CAP2 368 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 PTGS1P23219 599 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 RPS6KB1P23443 525 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 TLE2Q04725 743 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 FSCN1Q16658 493 aaKnown RBP15.28■□□□□ 0.04
SMAD3-213ENST00000560175 TRIM60Q495X7 471 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 SYNE3Q6ZMZ3 975 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 CMTR1Q8N1G2 835 aaKnown RBP15.28■□□□□ 0.04
SMAD3-213ENST00000560175 GLT1D1Q96MS3 346 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 SEZ6LQ9BYH1 1024 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 TM6SF1Q9BZW5 370 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 AP5M1Q9H0R1 490 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 ZSWIM6Q9HCJ5 1215 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 STARD7Q9NQZ5 370 aa15.28■□□□□ 0.04
SMAD3-213ENST00000560175 MYH7BA7E2Y1 1941 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 A6NJR5 290 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 MEIS2O14770 477 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 ZBTB43O43298 467 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 RGS20O76081 388 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 ARIH2O95376 493 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 SYN1P17600 705 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 PSMA5P28066 241 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 BEX3Q00994 111 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 TTLL4Q14679 1199 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 ARHGEF16Q5VV41 709 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 BLOC1S2Q6QNY1 142 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 MICU3Q86XE3 530 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 TEX2Q8IWB9 1127 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 IL17RAQ96F46 866 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 JAKMIP1Q96N16 626 aaKnown RBP15.27■□□□□ 0.04
SMAD3-213ENST00000560175 ATP11BQ9Y2G3 1177 aa15.27■□□□□ 0.04
SMAD3-213ENST00000560175 SCN10AQ9Y5Y9 1956 aa15.27■□□□□ 0.03
SMAD3-213ENST00000560175 SZT2Q5T011 3432 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 GRIN2DO15399 1336 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 CNTNAP5Q8WYK1 1306 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 ARVCFO00192 962 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 KIAA0355O15063 1070 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 ZEB2O60315 1214 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 CPA1P15085 419 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 CDC27P30260 824 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 HOXA13P31271 388 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-213ENST00000560175 MAGEA10P43363 369 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-213ENST00000560175 FAAP100Q0VG06 881 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 PGM5Q15124 567 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 Q6ZUG5 572 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 NOL8Q76FK4 1167 aaKnown RBP15.26■□□□□ 0.03
SMAD3-213ENST00000560175 EMID1Q96A84 441 aaPredicted RBP15.26■□□□□ 0.03
SMAD3-213ENST00000560175 PDLIM7Q9NR12 457 aa15.26■□□□□ 0.03
SMAD3-213ENST00000560175 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
SMAD3-213ENST00000560175 MROH7Q68CQ1 1323 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 A0A0U1RQG5 324 aaPredicted RBP15.25■□□□□ 0.03
SMAD3-213ENST00000560175 KLF18A0A0U1RQI7 1052 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 TRIM43BA6NCK2 446 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 CD4P01730 458 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 TXNP10599 105 aaKnown RBP15.25■□□□□ 0.03
SMAD3-213ENST00000560175 TGFB3P10600 412 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 EIF2AK2P19525 551 aaKnown RBP15.25■□□□□ 0.03
SMAD3-213ENST00000560175 RTN1Q16799 776 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 CXCL17Q6UXB2 119 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 RUFY3Q7L099 469 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 SH3RF1Q7Z6J0 888 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 RAB11FIP4Q86YS3 637 aa15.25■□□□□ 0.03
SMAD3-213ENST00000560175 TRIM43Q96BQ3 446 aaPredicted RBP15.25■□□□□ 0.03
SMAD3-213ENST00000560175 SEC63Q9UGP8 760 aaKnown RBP15.25■□□□□ 0.03
SMAD3-213ENST00000560175 KPNA6O60684 536 aa15.24■□□□□ 0.03
SMAD3-213ENST00000560175 STAM2O75886 525 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms