RNA–Protein interactions for RNA: ENST00000559849.5

CHRNB4-204, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNB4, Length 2,080 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-204ENST00000559849 MYCNP04198 464 aaPredicted RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 ADCYAP1R1P41586 468 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 STXBP2Q15833 593 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 NTRK3Q16288 839 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 GJC2Q5T442 439 aaPredicted RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 ZNF713Q8N859 430 aaPredicted RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 LARP6Q9BRS8 491 aaKnown RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 C11orf49Q9H6J7 331 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 PXMP2Q9NR77 195 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 PDGFCQ9NRA1 345 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 RBM27Q9P2N5 1060 aaKnown RBP15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 DNAH12Q6ZR08 3092 aa15.75■□□□□ 0.11
CHRNB4-204ENST00000559849 PIK3CDO00329 1044 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 PGK1P00558 417 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 NR3C2P08235 984 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 COL6A1P12109 1028 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 IFNAR1P17181 557 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 EIF2AK2P19525 551 aaKnown RBP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 NEK4P51957 841 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 LRRC41Q15345 812 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 NOL8Q76FK4 1167 aaKnown RBP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 FCHSD1Q86WN1 690 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 GPKOWQ92917 476 aaPredicted RBP eCLIP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 SPC25Q9HBM1 224 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 RBM47A0AV96 593 aaKnown RBP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 KBTBD13C9JR72 458 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 ADCY6O43306 1168 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 PRPF3O43395 683 aaKnown RBP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 AKAP17AQ02040 695 aaKnown RBP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 USP17L6PQ6QN14 398 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 SMARCC2Q8TAQ2 1214 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 LENG1Q96BZ8 264 aaPredicted RBP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 PDCD2LQ9BRP1 358 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 C22orf23Q9BZE7 217 aa15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 NCOA5Q9HCD5 579 aaKnown RBP15.74■□□□□ 0.11
CHRNB4-204ENST00000559849 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 MEIS2O14770 477 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 ADAMTS4O75173 837 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 EIF3JO75822 258 aaKnown RBP15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 AK2P54819 239 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 PFKFB3Q16875 520 aaPredicted RBP15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 WWC2Q6AWC2 1192 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 TEX2Q8IWB9 1127 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 RNF26Q9BY78 433 aaPredicted RBP15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 WDR11Q9BZH6 1224 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 UPF2Q9HAU5 1272 aaKnown RBP15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 BARHL2Q9NY43 387 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 SYNRGQ9UMZ2 1314 aa15.73■□□□□ 0.11
CHRNB4-204ENST00000559849 CPLX1O14810 134 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 SMPD1P17405 629 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 NAPAP54920 295 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 GJA9P57773 515 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 STK3Q13188 491 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 DUSP28Q4G0W2 176 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 PPP1R18Q6NYC8 613 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 CPLX2Q6PUV4 134 aaKnown RBP15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 VSIG10LQ86VR7 867 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 SCFD2Q8WU76 684 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 PHKBQ93100 1093 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 SENP6Q9GZR1 1112 aaPredicted RBP15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 GNEQ9Y223 722 aaKnown RBP15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 Q9Y3F1 56 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 LRRC37A2A6NM11 1700 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 C6orf222P0C671 652 aaPredicted RBP15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 SCG2P13521 617 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 RBM25P49756 843 aaKnown RBP15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 PGM5Q15124 567 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 DPF3Q92784 378 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 TSEN34Q9BSV6 310 aaKnown RBP15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 SLKQ9H2G2 1235 aaPredicted RBP15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 TPCN1Q9ULQ1 816 aa15.72■□□□□ 0.11
CHRNB4-204ENST00000559849 KIAA1217Q5T5P2 1943 aa15.71■□□□□ 0.11
CHRNB4-204ENST00000559849 KLHDC9Q8NEP7 349 aa15.71■□□□□ 0.11
CHRNB4-204ENST00000559849 AP5M1Q9H0R1 490 aa15.71■□□□□ 0.11
CHRNB4-204ENST00000559849 GLT8D2Q9H1C3 349 aa15.71■□□□□ 0.11
CHRNB4-204ENST00000559849 UPF3AQ9H1J1 476 aaKnown RBP15.71■□□□□ 0.11
CHRNB4-204ENST00000559849 STXBP3O00186 592 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 NKRFO15226 690 aaKnown RBP eCLIP15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 MYCLP12524 364 aaPredicted RBP15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 CST5P28325 142 aaPredicted RBP15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 NKX3-2P78367 333 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 TTLL4Q14679 1199 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 PKN1Q16512 942 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 GNASQ5JWF2 1037 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 TYW1BQ6NUM6 668 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 TLK2Q86UE8 772 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 TRIM22Q8IYM9 498 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 PCSK9Q8NBP7 692 aaKnown RBP15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 SLC26A6Q9BXS9 759 aa15.71■□□□□ 0.1
CHRNB4-204ENST00000559849 SMCO2A6NFE2 343 aa15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 DYNC1LI2O43237 492 aaPredicted RBP15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 PFKFB2O60825 505 aa15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 TXNP10599 105 aaKnown RBP15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 CCND2P30279 289 aa15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 SSRP1Q08945 709 aaKnown RBP15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 KCNA10Q16322 511 aa15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 TMEM63BQ5T3F8 832 aa15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 SEPT14Q6ZU15 432 aa15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 CCDC12Q8WUD4 166 aaPredicted RBP15.7■□□□□ 0.1
CHRNB4-204ENST00000559849 RIC8AQ9NPQ8 531 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms