RNA–Protein interactions for RNA: ENST00000559734.1

TRAF3-207, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-207ENST00000559734 GNAT2P19087 354 aa12.77□□□□□ -0.37
TRAF3-207ENST00000559734 PTPN11Q06124 597 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-207ENST00000559734 RCSD1Q6JBY9 416 aa12.77□□□□□ -0.37
TRAF3-207ENST00000559734 SLC30A10Q6XR72 485 aa12.77□□□□□ -0.37
TRAF3-207ENST00000559734 IFNL3Q8IZI9 196 aa12.77□□□□□ -0.37
TRAF3-207ENST00000559734 KBTBD3Q8NAB2 608 aa12.77□□□□□ -0.37
TRAF3-207ENST00000559734 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.77□□□□□ -0.37
TRAF3-207ENST00000559734 TGS1Q96RS0 853 aaKnown RBP12.77□□□□□ -0.37
TRAF3-207ENST00000559734 TSPY2A6NKD2 308 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 RNF113AO15541 343 aaKnown RBP12.76□□□□□ -0.37
TRAF3-207ENST00000559734 KPNA6O60684 536 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 SELPP16109 830 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 SLC16A2P36021 539 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 NHLH1Q02575 133 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 CACNB1Q02641 598 aaPredicted RBP12.76□□□□□ -0.37
TRAF3-207ENST00000559734 LRRFIP1Q32MZ4 808 aaKnown RBP12.76□□□□□ -0.37
TRAF3-207ENST00000559734 TSHZ3Q63HK5 1081 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 CNKSR3Q6P9H4 555 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 LRRC8DQ7L1W4 858 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 CAGE1Q8TC20 777 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 AFAP1L1Q8TED9 768 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 FBXL18Q96ME1 805 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 MPHOSPH6Q99547 160 aaKnown RBP12.76□□□□□ -0.37
TRAF3-207ENST00000559734 RAD9AQ99638 391 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 NACAP1Q9BZK3 213 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 LRRCC1Q9C099 1032 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 NAPBQ9H115 298 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 LCTP09848 1927 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 MUC6Q6W4X9 2439 aa12.76□□□□□ -0.37
TRAF3-207ENST00000559734 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 RBM47A0AV96 593 aaKnown RBP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 LINC01553A4QN01 128 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 PATL2C9JE40 543 aaKnown RBP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 H3BQ06 376 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 NKRFO15226 690 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 DCXO43602 365 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 NMT2O60551 498 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 PLA2G6O60733 806 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 GJB5O95377 273 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 TXNP10599 105 aaKnown RBP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 ERVK-21P61565 698 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 PPARAQ07869 468 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 PPP4R3BQ5MIZ7 849 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 FRMPD2Q68DX3 1309 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 TTBK2Q6IQ55 1244 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 GDF6Q6KF10 455 aaPredicted RBP12.75□□□□□ -0.37
TRAF3-207ENST00000559734 RNF207Q6ZRF8 634 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 FBXO22Q8NEZ5 403 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 SCFD2Q8WU76 684 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 ECHDC1Q9NTX5 307 aa12.75□□□□□ -0.37
TRAF3-207ENST00000559734 PTPRSQ13332 1948 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 GRXCR2A6NFK2 248 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 A6NJR5 290 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 ZFYP08048 801 aaPredicted RBP12.74□□□□□ -0.37
TRAF3-207ENST00000559734 TCTN1Q2MV58 587 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 SYDE2Q5VT97 1194 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 CHST3Q7LGC8 479 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 AFG1LQ8WV93 481 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 SEC62Q99442 399 aaKnown RBP12.74□□□□□ -0.37
TRAF3-207ENST00000559734 C17orf80Q9BSJ5 609 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
TRAF3-207ENST00000559734 GPCPD1Q9NPB8 672 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 SCN10AQ9Y5Y9 1956 aa12.74□□□□□ -0.37
TRAF3-207ENST00000559734 TET1Q8NFU7 2136 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 LOC102724159A0A0B4J2E5 919 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 ABHD14A-ACY1A0A1B0GW23 586 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 RANBP6O60518 1105 aaKnown RBP12.73□□□□□ -0.37
TRAF3-207ENST00000559734 NBNO60934 754 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 ARIH2O95376 493 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 CTDSPL2Q05D32 466 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 GPNMBQ14956 572 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 PWP2Q15269 919 aaKnown RBP12.73□□□□□ -0.37
TRAF3-207ENST00000559734 DCAF4Q8WV16 495 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 DHX38Q92620 1227 aaKnown RBP12.73□□□□□ -0.37
TRAF3-207ENST00000559734 GPATCH3Q96I76 525 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 SNX27Q96L92 541 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 INCENPQ9NQS7 918 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 DDX19BQ9UMR2 479 aa12.73□□□□□ -0.37
TRAF3-207ENST00000559734 MMP3P08254 477 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 MS4A1P11836 297 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 CKBP12277 381 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 RPS6P62753 249 aaKnown RBP12.72□□□□□ -0.37
TRAF3-207ENST00000559734 HNRNPUQ00839 825 aaKnown RBP eCLIP12.72□□□□□ -0.37
TRAF3-207ENST00000559734 IKBKEQ14164 716 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 PTPROQ16827 1216 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
TRAF3-207ENST00000559734 SEPT14Q6ZU15 432 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 MYOCDQ8IZQ8 938 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 ALG1Q9BT22 464 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 IL17RBQ9NRM6 502 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 TOMM22Q9NS69 142 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 ZBTB40Q9NUA8 1239 aa12.72□□□□□ -0.37
TRAF3-207ENST00000559734 B4DLN1 442 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 EFCAB14O75071 495 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 PARNO95453 639 aaKnown RBP12.71□□□□□ -0.37
TRAF3-207ENST00000559734 GH1P01241 217 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 CXCL10P02778 98 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 MRPL12P52815 198 aaKnown RBP12.71□□□□□ -0.37
TRAF3-207ENST00000559734 LY6KQ17RY6 165 aa12.71□□□□□ -0.37
TRAF3-207ENST00000559734 TIGD5Q53EQ6 642 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms