RNA–Protein interactions for RNA: ENST00000559550.1

CASC4-210, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 264 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-210ENST00000559550 WTIPA6NIX2 430 aaPredicted RBP5.16□□□□□ -1.58
CASC4-210ENST00000559550 HRKO00198 91 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 ARNTLO00327 626 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 N4BP3O15049 544 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 PDPK1O15530 556 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 PRICKLE3O43900 615 aaPredicted RBP5.16□□□□□ -1.58
CASC4-210ENST00000559550 THBDP07204 575 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 PLS3P13797 630 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 SDHBP21912 280 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 SRSF3P84103 164 aaKnown RBP5.16□□□□□ -1.58
CASC4-210ENST00000559550 MVKQ03426 396 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 RASA3Q14644 834 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 RTP5Q14D33 572 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 HLA-DQA1Q5Y7H0 255 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 DENND5AQ6IQ26 1287 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 GALNT18Q6P9A2 607 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 CPNE8Q86YQ8 564 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 TP53I13Q8NBR0 393 aaPredicted RBP5.16□□□□□ -1.58
CASC4-210ENST00000559550 ST13P5Q8NFI4 369 aaPredicted RBP5.16□□□□□ -1.58
CASC4-210ENST00000559550 NPLOC4Q8TAT6 608 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 FRS2Q8WU20 508 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 CCDC113Q9H0I3 377 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 CNTD2Q9H8S5 307 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 CYP26B1Q9NR63 512 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 CLEC1BQ9P126 229 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 TAF6LQ9Y6J9 622 aa5.16□□□□□ -1.58
CASC4-210ENST00000559550 DIAPH1O60610 1272 aaKnown RBP5.15□□□□□ -1.59
CASC4-210ENST00000559550 PPP1R11O60927 126 aaPredicted RBP5.15□□□□□ -1.59
CASC4-210ENST00000559550 TBC1D8O95759 1140 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 SNRPB2P08579 225 aaKnown RBP5.15□□□□□ -1.59
CASC4-210ENST00000559550 PRKCAP17252 672 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 ECI1P42126 302 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 GFRA1P56159 465 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 ZXDAP98168 799 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 LAPTM5Q13571 262 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 RASGRF1Q13972 1273 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 PRSS53Q2L4Q9 553 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 YOD1Q5VVQ6 348 aaPredicted RBP5.15□□□□□ -1.59
CASC4-210ENST00000559550 JAMLQ86YT9 394 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 KREMEN2Q8NCW0 462 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 NUP43Q8NFH3 380 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 DRC1Q96MC2 740 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 ARHGEF4Q9NR80 690 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 SNTG2Q9NY99 539 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 TMEFF2Q9UIK5 374 aaPredicted RBP5.15□□□□□ -1.59
CASC4-210ENST00000559550 ACSL6Q9UKU0 697 aa5.15□□□□□ -1.59
CASC4-210ENST00000559550 NPHP3-ACAD11A0A0J9YXS1 232 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 OR14I1A6ND48 311 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 AGRPO00253 132 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 SCG5P05408 212 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 PAMP19021 973 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 HOXC12P31275 282 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 FAM129CQ86XR2 697 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 CCDC103Q8IW40 242 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 TMEM145Q8NBT3 493 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 C1orf159Q96HA4 380 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 SGSM3Q96HU1 749 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 DEPDC7Q96QD5 511 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 GPR20Q99678 358 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 CRTAC1Q9NQ79 661 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 FBLN5Q9UBX5 448 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 PFDN2Q9UHV9 154 aa5.14□□□□□ -1.59
CASC4-210ENST00000559550 ADCY3O60266 1144 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 DLX3O60479 287 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 PNLIPP16233 465 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 TACR1P25103 407 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 L1CAMP32004 1257 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 KCNJ6P48051 423 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 CYP4F8P98187 520 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 INF2Q27J81 1249 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 MTERF2Q49AM1 385 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 SLC35F1Q5T1Q4 408 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 ADGRF1Q5T601 910 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 LINC01356Q8N9X3 169 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 DPF3Q92784 378 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 OSBP2Q969R2 916 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 IER2Q9BTL4 223 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 SPATA9Q9BWV2 254 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 GULP1Q9UBP9 304 aa5.13□□□□□ -1.59
CASC4-210ENST00000559550 CNOT11Q9UKZ1 510 aaKnown RBP5.13□□□□□ -1.59
CASC4-210ENST00000559550 C7orf72A4D263 438 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 IQCA1LA6NCM1 817 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 MATN3O15232 486 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 VIPR1P32241 457 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 HSP90AA2PQ14568 343 aaPredicted RBP5.12□□□□□ -1.59
CASC4-210ENST00000559550 ZFYVE27Q5T4F4 411 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 SOGA3Q5TF21 947 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 SLC16A11Q8NCK7 471 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 ZNF669Q96BR6 464 aaPredicted RBP5.12□□□□□ -1.59
CASC4-210ENST00000559550 CCDC140Q96MF4 163 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 SRPK1Q96SB4 655 aaKnown RBP5.12□□□□□ -1.59
CASC4-210ENST00000559550 MMP19Q99542 508 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 AARSD1Q9BTE6 412 aaKnown RBP5.12□□□□□ -1.59
CASC4-210ENST00000559550 OSBPL2Q9H1P3 480 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 TNFRSF12AQ9NP84 129 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 RWDD3Q9Y3V2 267 aa5.12□□□□□ -1.59
CASC4-210ENST00000559550 PRODHO43272 600 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 CPP00450 1065 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 LCP1P13796 627 aa5.11□□□□□ -1.59
CASC4-210ENST00000559550 CDR1P51861 262 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms