RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 CSPG5O95196 566 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 CKBP12277 381 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 CTNNB1P35222 781 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 LTBRP36941 435 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 PDE4BQ07343 736 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 LRRC47Q8N1G4 583 aaKnown RBP11.56□□□□□ -0.56
SMAD3-211ENST00000559460 SP7Q8TDD2 431 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-211ENST00000559460 C11orf84Q9BUA3 381 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-211ENST00000559460 CLIP2Q9UDT6 1046 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 DDX49Q9Y6V7 483 aaKnown RBP11.56□□□□□ -0.56
SMAD3-211ENST00000559460 EMSYQ7Z589 1322 aa11.56□□□□□ -0.56
SMAD3-211ENST00000559460 ZFHX2Q9C0A1 2572 aaPredicted RBP11.56□□□□□ -0.56
SMAD3-211ENST00000559460 MED19A0JLT2 244 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-211ENST00000559460 LGR5O75473 907 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 BMP3P12645 472 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 HTRA4P83105 476 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-211ENST00000559460 DLX2Q07687 328 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-211ENST00000559460 HYAL1Q12794 435 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 CTC1Q2NKJ3 1217 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.55□□□□□ -0.56
SMAD3-211ENST00000559460 FAM160B2Q86V87 743 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
SMAD3-211ENST00000559460 CHURC1Q8WUH1 139 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 CYP39A1Q9NYL5 469 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 RWDD3Q9Y3V2 267 aa11.55□□□□□ -0.56
SMAD3-211ENST00000559460 LOC730098B7Z3J9 87 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 TMEM232C9JQI7 657 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 TBX10O75333 385 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 UPP2O95045 317 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 MBD4O95243 580 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 PDE4DQ08499 809 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 RBL2Q08999 1139 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 GDF6Q6KF10 455 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-211ENST00000559460 C7orf31Q8N865 590 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 SCFD2Q8WU76 684 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 RPGRIP1Q96KN7 1286 aa11.54□□□□□ -0.56
SMAD3-211ENST00000559460 ARPP21Q9UBL0 812 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-211ENST00000559460 TET1Q8NFU7 2136 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 LOC102724159A0A0B4J2E5 919 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 A6NJR5 290 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 B4DLN1 442 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 PRKAB2O43741 272 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 RB1P06400 928 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 ALDH5A1P51649 535 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-211ENST00000559460 MRPL12P52815 198 aaKnown RBP11.53□□□□□ -0.56
SMAD3-211ENST00000559460 GPNMBQ14956 572 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 PWP2Q15269 919 aaKnown RBP11.53□□□□□ -0.56
SMAD3-211ENST00000559460 SLFN13Q68D06 897 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 FRMD5Q7Z6J6 570 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 SESTD1Q86VW0 696 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 FAM9BQ8IZU0 186 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 STK11IPQ8N1F8 1099 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 FIBCD1Q8N539 461 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 MORC4Q8TE76 937 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 ASIC4Q96FT7 647 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 DNAJC2Q99543 621 aaKnown RBP11.53□□□□□ -0.56
SMAD3-211ENST00000559460 KATNAL1Q9BW62 490 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 PHF7Q9BWX1 381 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-211ENST00000559460 ZNF287Q9HBT7 754 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 ALG13Q9NP73 1137 aaKnown RBP11.53□□□□□ -0.56
SMAD3-211ENST00000559460 INCENPQ9NQS7 918 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 CCPG1Q9ULG6 757 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 PLXNA3P51805 1871 aa11.53□□□□□ -0.56
SMAD3-211ENST00000559460 SCN10AQ9Y5Y9 1956 aa11.52□□□□□ -0.56
SMAD3-211ENST00000559460 PTPDC1A2A3K4 754 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 GOLIM4O00461 696 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 TXNP10599 105 aaKnown RBP11.52□□□□□ -0.57
SMAD3-211ENST00000559460 ICAM3P32942 547 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 PTK7Q13308 1070 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 PTPN21Q16825 1174 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 TCTN1Q2MV58 587 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 AACSQ86V21 672 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 GMCL1P1Q8NEA9 526 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 DBF4BQ8NFT6 615 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 KCNG4Q8TDN1 519 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 DHX38Q92620 1227 aaKnown RBP11.52□□□□□ -0.57
SMAD3-211ENST00000559460 EAF2Q96CJ1 260 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-211ENST00000559460 RIPOR3Q96MK2 946 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 CNTNAP3BQ96NU0 1288 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 IFIH1Q9BYX4 1025 aaKnown RBP11.52□□□□□ -0.57
SMAD3-211ENST00000559460 CNTNAP3Q9BZ76 1288 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 DDX24Q9GZR7 859 aaKnown RBP eCLIP11.52□□□□□ -0.57
SMAD3-211ENST00000559460 SYNPO2Q9UMS6 1093 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 SLC4A4Q9Y6R1 1079 aa11.52□□□□□ -0.57
SMAD3-211ENST00000559460 PTPRZ1P23471 2315 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-211ENST00000559460 RBM47A0AV96 593 aaKnown RBP11.51□□□□□ -0.57
SMAD3-211ENST00000559460 LINC01565O15544 149 aa11.51□□□□□ -0.57
SMAD3-211ENST00000559460 RGS20O76081 388 aa11.51□□□□□ -0.57
SMAD3-211ENST00000559460 EYA4O95677 639 aa11.51□□□□□ -0.57
SMAD3-211ENST00000559460 TTLL1O95922 423 aa11.51□□□□□ -0.57
SMAD3-211ENST00000559460 CT47B1P0C2W7 299 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-211ENST00000559460 CASTP20810 708 aaKnown RBP11.51□□□□□ -0.57
SMAD3-211ENST00000559460 SLC1A4P43007 532 aa11.51□□□□□ -0.57
SMAD3-211ENST00000559460 PUM1Q14671 1186 aaKnown RBP eCLIP11.51□□□□□ -0.575e-6■□□□□ 10.2
SMAD3-211ENST00000559460 CBX2Q14781 532 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-211ENST00000559460 MUM1L1Q5H9M0 696 aa11.51□□□□□ -0.57
SMAD3-211ENST00000559460 ZNF618Q5T7W0 954 aa11.51□□□□□ -0.57
SMAD3-211ENST00000559460 DHX37Q8IY37 1157 aaKnown RBP11.51□□□□□ -0.57
SMAD3-211ENST00000559460 ZNF444Q8N0Y2 327 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-211ENST00000559460 SEPT8Q92599 483 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms