RNA–Protein interactions for RNA: ENST00000559432.5

CRNDE-206, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 3 BASIC

Gene CRNDE, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-206ENST00000559432 CASC1Q6TDU7 716 aa29.26■■■□□ 2.27
CRNDE-206ENST00000559432 RNPC3Q96LT9 517 aaKnown RBP29.26■■■□□ 2.27
CRNDE-206ENST00000559432 PPP1R12CQ9BZL4 782 aa29.26■■■□□ 2.27
CRNDE-206ENST00000559432 LSG1Q9H089 658 aaKnown RBP29.26■■■□□ 2.27
CRNDE-206ENST00000559432 SZT2Q5T011 3432 aa29.26■■■□□ 2.27
CRNDE-206ENST00000559432 CD4P01730 458 aa29.25■■■□□ 2.27
CRNDE-206ENST00000559432 EPHB4P54760 987 aa29.25■■■□□ 2.27
CRNDE-206ENST00000559432 TROAPQ12815 778 aa29.25■■■□□ 2.27
CRNDE-206ENST00000559432 BMP2KLQ5H9B9 411 aa29.25■■■□□ 2.27
CRNDE-206ENST00000559432 TMEM199Q8N511 208 aa29.25■■■□□ 2.27
CRNDE-206ENST00000559432 IGDCC4Q8TDY8 1250 aa29.25■■■□□ 2.27
CRNDE-206ENST00000559432 LAMA3Q16787 3333 aa29.25■■■□□ 2.27
CRNDE-206ENST00000559432 PPIGQ13427 754 aaKnown RBP eCLIP29.24■■■□□ 2.27
CRNDE-206ENST00000559432 PIGSQ96S52 555 aa29.24■■■□□ 2.27
CRNDE-206ENST00000559432 MTG1Q9BT17 334 aaPredicted RBP29.24■■■□□ 2.27
CRNDE-206ENST00000559432 RIOX1Q9H6W3 641 aa29.24■■■□□ 2.27
CRNDE-206ENST00000559432 ANO2Q9NQ90 1003 aa29.24■■■□□ 2.27
CRNDE-206ENST00000559432 MAP3K20Q9NYL2 800 aaKnown RBP29.24■■■□□ 2.27
CRNDE-206ENST00000559432 GRIN2DO15399 1336 aa29.23■■■□□ 2.27
CRNDE-206ENST00000559432 PPP1R11O60927 126 aaPredicted RBP29.23■■■□□ 2.27
CRNDE-206ENST00000559432 EIF2AK2P19525 551 aaKnown RBP29.23■■■□□ 2.27
CRNDE-206ENST00000559432 HSD17B4P51659 736 aa29.23■■■□□ 2.27
CRNDE-206ENST00000559432 PURAQ00577 322 aaKnown RBP29.23■■■□□ 2.27
CRNDE-206ENST00000559432 FAM109BQ6ICB4 259 aaPredicted RBP29.23■■■□□ 2.27
CRNDE-206ENST00000559432 SEPT14Q6ZU15 432 aa29.23■■■□□ 2.27
CRNDE-206ENST00000559432 COPS5Q92905 334 aa29.23■■■□□ 2.27
CRNDE-206ENST00000559432 MTMR10Q9NXD2 777 aa29.23■■■□□ 2.27
CRNDE-206ENST00000559432 PRC1O43663 620 aa29.22■■■□□ 2.27
CRNDE-206ENST00000559432 KPNA6O60684 536 aa29.22■■■□□ 2.27
CRNDE-206ENST00000559432 MCM5P33992 734 aa29.22■■■□□ 2.27
CRNDE-206ENST00000559432 SAMD3Q8N6K7 520 aa29.22■■■□□ 2.27
CRNDE-206ENST00000559432 MTA3Q9BTC8 594 aa29.22■■■□□ 2.27
CRNDE-206ENST00000559432 PXMP2Q9NR77 195 aa29.22■■■□□ 2.27
CRNDE-206ENST00000559432 MYH6P13533 1939 aa29.22■■■□□ 2.27
CRNDE-206ENST00000559432 PNMA6FA0A0J9YX94 578 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 OPLAHO14841 1288 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 SLC27A2O14975 620 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 SMAD3P84022 425 aaKnown RBP29.21■■■□□ 2.27
CRNDE-206ENST00000559432 GHRHRQ02643 423 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 ZNF697Q5TEC3 545 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 NFXL1Q6ZNB6 911 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 CTCFLQ8NI51 663 aaPredicted RBP29.21■■■□□ 2.27
CRNDE-206ENST00000559432 HIPK3Q9H422 1215 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 LY9Q9HBG7 655 aa29.21■■■□□ 2.27
CRNDE-206ENST00000559432 A6NJR5 290 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 B4GALT4O60513 344 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 DDAH1O94760 285 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 ARIH2O95376 493 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 CSF2RAP15509 400 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 KIF5BP33176 963 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 SLC35G1Q2M3R5 365 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 CREB3L3Q68CJ9 461 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 SKAP1Q86WV1 359 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 ZNF654Q8IZM8 581 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 TMTC2Q8N394 836 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 MAP3K14Q99558 947 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 TRPV6Q9H1D0 765 aa29.2■■■□□ 2.26
CRNDE-206ENST00000559432 CCDC69A6NI79 296 aa29.19■■■□□ 2.26
CRNDE-206ENST00000559432 CYTH3O43739 400 aa29.19■■■□□ 2.26
CRNDE-206ENST00000559432 EIF3JO75822 258 aaKnown RBP29.19■■■□□ 2.26
CRNDE-206ENST00000559432 GH1P01241 217 aa29.19■■■□□ 2.26
CRNDE-206ENST00000559432 NR3C2P08235 984 aa29.19■■■□□ 2.26
CRNDE-206ENST00000559432 CCDC62Q6P9F0 684 aa29.19■■■□□ 2.26
CRNDE-206ENST00000559432 TMEM87BQ96K49 555 aa29.19■■■□□ 2.26
CRNDE-206ENST00000559432 ALDH8A1Q9H2A2 487 aaPredicted RBP29.19■■■□□ 2.26
CRNDE-206ENST00000559432 SUPT20HL2P0C7V6 817 aa29.18■■■□□ 2.26
CRNDE-206ENST00000559432 HOXA13P31271 388 aaPredicted RBP29.18■■■□□ 2.26
CRNDE-206ENST00000559432 CYP2C18P33260 490 aa29.18■■■□□ 2.26
CRNDE-206ENST00000559432 NECTIN1Q15223 517 aa29.18■■■□□ 2.26
CRNDE-206ENST00000559432 LY6KQ17RY6 165 aa29.18■■■□□ 2.26
CRNDE-206ENST00000559432 FAM47CQ5HY64 1035 aa29.18■■■□□ 2.26
CRNDE-206ENST00000559432 RNF20Q5VTR2 975 aa29.18■■■□□ 2.26
CRNDE-206ENST00000559432 BUD13Q9BRD0 619 aaKnown RBP eCLIP29.18■■■□□ 2.26
CRNDE-206ENST00000559432 GCOM1H8Y6P7 765 aaPredicted RBP29.17■■■□□ 2.26
CRNDE-206ENST00000559432 POLR2MP0CAP2 368 aa29.17■■■□□ 2.26
CRNDE-206ENST00000559432 MYCLP12524 364 aaPredicted RBP29.17■■■□□ 2.26
CRNDE-206ENST00000559432 PIBF1Q8WXW3 757 aa29.17■■■□□ 2.26
CRNDE-206ENST00000559432 MYL10Q9BUA6 226 aa29.17■■■□□ 2.26
CRNDE-206ENST00000559432 STXBP5LQ9Y2K9 1186 aa29.17■■■□□ 2.26
CRNDE-206ENST00000559432 MRVI1Q9Y6F6 885 aa29.17■■■□□ 2.26
CRNDE-206ENST00000559432 SH2B2O14492 632 aaPredicted RBP29.16■■■□□ 2.26
CRNDE-206ENST00000559432 PSRC1Q6PGN9 363 aaPredicted RBP29.16■■■□□ 2.26
CRNDE-206ENST00000559432 AFG1LQ8WV93 481 aa29.16■■■□□ 2.26
CRNDE-206ENST00000559432 RRP36Q96EU6 259 aaKnown RBP29.16■■■□□ 2.26
CRNDE-206ENST00000559432 FAM161BQ96MY7 647 aa29.16■■■□□ 2.26
CRNDE-206ENST00000559432 PDCD2LQ9BRP1 358 aa29.16■■■□□ 2.26
CRNDE-206ENST00000559432 GNAQP50148 359 aa29.15■■■□□ 2.26
CRNDE-206ENST00000559432 NBPF20Q3BBV1 942 aa29.15■■■□□ 2.26
CRNDE-206ENST00000559432 LZTS2Q9BRK4 669 aa29.15■■■□□ 2.26
CRNDE-206ENST00000559432 NOC4LQ9BVI4 516 aaKnown RBP29.15■■■□□ 2.26
CRNDE-206ENST00000559432 SPZ1Q9BXG8 430 aa29.15■■■□□ 2.26
CRNDE-206ENST00000559432 HSFX4A0A1B0GTS1 333 aaPredicted RBP29.14■■■□□ 2.26
CRNDE-206ENST00000559432 HSFX3A0A1B0GWH4 333 aaPredicted RBP29.14■■■□□ 2.26
CRNDE-206ENST00000559432 CALM1P0DP23 149 aa29.14■■■□□ 2.26
CRNDE-206ENST00000559432 CALM2P0DP24 149 aa29.14■■■□□ 2.26
CRNDE-206ENST00000559432 CALM3P0DP25 149 aa29.14■■■□□ 2.26
CRNDE-206ENST00000559432 ACRP10323 421 aa29.14■■■□□ 2.26
CRNDE-206ENST00000559432 ARHGAP1Q07960 439 aa29.14■■■□□ 2.26
CRNDE-206ENST00000559432 TMEM240Q5SV17 173 aa29.14■■■□□ 2.26
CRNDE-206ENST00000559432 NFRKBQ6P4R8 1299 aa29.14■■■□□ 2.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms