RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 SRRDQ9UH36 339 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 MTMR6Q9Y217 621 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 MYH7BA7E2Y1 1941 aa16.98■□□□□ 0.31
SNRPA1-207ENST00000559309 BTBD18B2RXH4 712 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 KIF28PB7ZC32 967 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 PGK2P07205 417 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 PRMT2P55345 433 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 EARS2Q5JPH6 523 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 CTU1Q7Z7A3 348 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 DIS3L2Q8IYB7 885 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 MSL3Q8N5Y2 521 aaKnown RBP16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 NPLOC4Q8TAT6 608 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 MAML3Q96JK9 1138 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 NUDT12Q9BQG2 462 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 FOXD4L1Q9NU39 408 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 GABRQQ9UN88 632 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 IVNS1ABPQ9Y6Y0 642 aa16.97■□□□□ 0.31
SNRPA1-207ENST00000559309 POTEB2H3BUK9 544 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 STX6O43752 255 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 KRT2P35908 639 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 SREBF1P36956 1147 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 PRKCZQ05513 592 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 NR5A1Q13285 461 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 KIF22Q14807 665 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 OLFML2BQ68BL8 750 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 OTOP1Q7RTM1 612 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 IPO9Q96P70 1041 aaKnown RBP16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 APBA2Q99767 749 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 PDCD2LQ9BRP1 358 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 KATNBL1Q9H079 304 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 PXMP2Q9NR77 195 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 TMEM260Q9NX78 707 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 BIN2Q9UBW5 565 aaPredicted RBP16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 ZDHHC9Q9Y397 364 aa16.96■□□□□ 0.31
SNRPA1-207ENST00000559309 CYP3A4P08684 503 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 RGS2P41220 211 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 FLT3LGP49771 235 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 ALDH5A1P51649 535 aaPredicted RBP16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 GUCY1B3Q02153 619 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 TRIM29Q14134 588 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 RASGRP4Q8TDF6 673 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 IWS1Q96ST2 819 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 ANO3Q9BYT9 981 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 FLRT1Q9NZU1 646 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 SYNGAP1Q96PV0 1343 aa16.95■□□□□ 0.3
SNRPA1-207ENST00000559309 KIAA1217Q5T5P2 1943 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 BRD1O95696 1058 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 PKP1Q13835 747 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 ARHGEF6Q15052 776 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 PGM5Q15124 567 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 WDR78Q5VTH9 848 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 PCNX4Q63HM2 1172 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 XRRA1Q6P2D8 792 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 KRT25Q7Z3Z0 450 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 VSIG10LQ86VR7 867 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 CCAR1Q8IX12 1150 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 PXYLP1Q8TE99 480 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 NSUN6Q8TEA1 469 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 MBOAT7Q96N66 472 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 RMDN3Q96TC7 470 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 ADD3Q9UEY8 706 aaKnown RBP16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 MCM3APO60318 1980 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 MYH15Q9Y2K3 1946 aa16.94■□□□□ 0.3
SNRPA1-207ENST00000559309 CYP3A7-CYP3A51PA0A087WV96 503 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 FAM205CA6NFA0 338 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 RGS20O76081 388 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 HSP90AA1P07900 732 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 CYP3A7P24462 503 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 HOXD10P28358 340 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 CIITAP33076 1130 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 MRPS9P82933 396 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 RESTQ13127 1097 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 PKN2Q16513 984 aaKnown RBP16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 NOSTRINQ8IVI9 506 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 SPRYD3Q8NCJ5 442 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 IL31RAQ8NI17 732 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 SLC5A4Q9NY91 659 aa16.93■□□□□ 0.3
SNRPA1-207ENST00000559309 SPDYE3A6NKU9 549 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 SNAI1O95863 264 aaPredicted RBP16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 USP11P51784 963 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 SAFBQ15424 915 aaKnown RBP eCLIP16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 MOXD1Q6UVY6 613 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 DPP9Q86TI2 863 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 FCHSD1Q86WN1 690 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 TINF2Q9BSI4 451 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 BRMS1Q9HCU9 246 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 PCDH10Q9P2E7 1040 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 PTPN22Q9Y2R2 807 aa16.92■□□□□ 0.3
SNRPA1-207ENST00000559309 IGLV3-22A0A075B6J6 115 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 ASB14A6NK59 587 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 NR3C2P08235 984 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 ZSCAN22P10073 491 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 TOB1P50616 345 aaPredicted RBP16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 FOSBP53539 338 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 SOX10P56693 466 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 ARHGAP4P98171 946 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 NONOQ15233 471 aaKnown RBP eCLIP16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 CCL14Q16627 93 aa16.91■□□□□ 0.3
SNRPA1-207ENST00000559309 MAP3K21Q5TCX8 1036 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms