RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 SUCOQ9UBS9 1254 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 RCAN3Q9UKA8 241 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 CRYL1Q9Y2S2 319 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 NFAT5O94916 1531 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 LTN1O94822 1766 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 KDM3BQ7LBC6 1761 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 ABCC11Q96J66 1382 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 NUP188Q5SRE5 1749 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 BRWD3Q6RI45 1802 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 TUBGCP6Q96RT7 1819 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 YTHDC2Q9H6S0 1430 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 TULP2O00295 520 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 KIAA0754O94854 1291 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 HSPA5P11021 654 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 AKNAD1Q5T1N1 836 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 RMDN2Q96LZ7 410 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 CSRNP1Q96S65 589 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 KCNK17Q96T54 332 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 GPATCH1Q9BRR8 931 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 TLR6Q9Y2C9 796 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 PCDHB3Q9Y5E6 796 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 FSD2A1L4K1 749 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 STXBP3O00186 592 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 AKR1B1P15121 316 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 ZNF280AP59817 542 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 AP1B1Q10567 949 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 TRAF1Q13077 416 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 VWA3BQ502W6 1294 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 IRGCQ6NXR0 463 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 C16orf46Q6P387 395 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 NXPE4Q6UWF7 544 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 C6orf15Q6UXA7 325 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 SLC44A2Q8IWA5 706 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 OR8H1Q8NGG4 311 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 BICD1Q96G01 975 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 MYLK2Q9H1R3 596 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 EPB41L4AQ9HCS5 686 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 EXOC1Q9NV70 894 aa6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 PIH1D1Q9NWS0 290 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-206ENST00000559175 PLOD3O60568 738 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 CDKL5O76039 1030 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 MMEP08473 750 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 HADHAP40939 763 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 TBX2Q13207 712 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCBE1Q6UXH8 406 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 TMEM110Q86TL2 294 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 CCDC65Q8IXS2 484 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 TESK2Q96S53 571 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 MAN1C1Q9NR34 630 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 ZNHIT6Q9NWK9 470 aaKnown RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 PCDHGA4Q9Y5G9 962 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 NSD2O96028 1365 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 DLG5Q8TDM6 1919 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 ARFGEF2Q9Y6D5 1785 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 EYA2O00167 538 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 DYNC1I1O14576 645 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 TLR3O15455 904 aaKnown RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 CSPG5O95196 566 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 MSL3P1P0C860 447 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 FGFR4P22455 802 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 SOX9P48436 509 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 TMED1Q13445 227 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 SKOR2Q2VWA4 1001 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 MINDY4Q4G0A6 757 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 NLRP14Q86W24 1093 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 MSANTD4Q8NCY6 345 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 AGAP3Q96P47 875 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 CITED4Q96RK1 184 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 SEC62Q99442 399 aaKnown RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 MYD88Q99836 296 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 RASSF4Q9H2L5 321 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 PICK1Q9NRD5 415 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 HELLSQ9NRZ9 838 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 FAM198AQ9UFP1 575 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 ZMYM5Q9UJ78 669 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 CFAP45Q9UL16 551 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 MUSKO15146 869 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 TGDSO95455 350 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 GARTP22102 1010 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 XPAP23025 273 aaPredicted RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 NOP2P46087 812 aaKnown RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 FXR2P51116 673 aaKnown RBP eCLIP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 SCNN1DP51172 638 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 HNRNPMP52272 730 aaKnown RBP eCLIP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 YARSP54577 528 aaKnown RBP6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 NFKBIBQ15653 356 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 FAM117BQ6P1L5 589 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 CEP57L1Q8IYX8 460 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 PPM1NQ8N819 430 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 SLC39A3Q9BRY0 314 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 DHRS4Q9BTZ2 278 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 YIPF2Q9BWQ6 316 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 TMEM165Q9HC07 324 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 GGA3Q9NZ52 723 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 STAP2Q9UGK3 403 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 FKBPLQ9UIM3 349 aa6.5□□□□□ -1.37
CTDSPL2-206ENST00000559175 COL5A3P25940 1745 aaPredicted RBP6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 KPNA6O60684 536 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 MICAL2O94851 1124 aa6.49□□□□□ -1.37
CTDSPL2-206ENST00000559175 ASGR2P07307 311 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms