RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 PAK2Q13177 524 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 DDB1Q16531 1140 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 MARCH10Q8NA82 808 aaPredicted RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 FLAD1Q8NFF5 587 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 IP6K1Q92551 441 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 UBE2FQ969M7 185 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 VWCEQ96DN2 955 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 ASCC2Q9H1I8 757 aaPredicted RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 DUSP15Q9H1R2 295 aaPredicted RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 RC3H2Q9HBD1 1191 aaKnown RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 ATP13A1Q9HD20 1204 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 MBNL3Q9NUK0 354 aaKnown RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 RGPD3A6NKT7 1758 aaPredicted RBP6.81□□□□□ -1.32
CASC4-207ENST00000559037 RGPD4Q7Z3J3 1758 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 SRCAPQ6ZRS2 3230 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 NUP188Q5SRE5 1749 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 ANKRD36BQ8N2N9 1353 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 CCDC7Q96M83 1385 aa6.81□□□□□ -1.32
CASC4-207ENST00000559037 EXOC5O00471 708 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 BCL9O00512 1426 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 CLEC3AO75596 197 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 RNASE1P07998 156 aaKnown RBP6.8□□□□□ -1.32
CASC4-207ENST00000559037 CD96P40200 585 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 EZH2Q15910 746 aaKnown RBP6.8□□□□□ -1.32
CASC4-207ENST00000559037 GAB4Q2WGN9 574 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 TSPYL5Q86VY4 417 aaPredicted RBP6.8□□□□□ -1.32
CASC4-207ENST00000559037 OR6P1Q8NGX9 317 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 ASIC4Q96FT7 647 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 COG3Q96JB2 828 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 DHRS1Q96LJ7 313 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 CCSER2Q9H7U1 834 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 CARS2Q9HA77 564 aaKnown RBP6.8□□□□□ -1.32
CASC4-207ENST00000559037 ZSWIM5Q9P217 1185 aa6.8□□□□□ -1.32
CASC4-207ENST00000559037 SHANK3Q9BYB0 1731 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 BTAF1O14981 1849 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 PLSCR1O15162 318 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 PTF1AQ7RTS3 328 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 SMARCC1Q92922 1105 aaPredicted RBP6.79□□□□□ -1.32
CASC4-207ENST00000559037 SEC16BQ96JE7 1060 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 KRTAP4-12Q9BQ66 201 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 PRR13Q9NZ81 148 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 ADAMTS6Q9UKP5 1117 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 STRIP2Q9ULQ0 834 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 PARD3Q8TEW0 1356 aa6.79□□□□□ -1.32
CASC4-207ENST00000559037 MAP3K19Q56UN5 1328 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 ITGB4P16144 1822 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 OVOS2A0A0G2JMS6 1433 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 TCF3P15923 654 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 TPP2P29144 1249 aaPredicted RBP6.78□□□□□ -1.32
CASC4-207ENST00000559037 NBPF12Q5TAG4 269 aaPredicted RBP6.78□□□□□ -1.32
CASC4-207ENST00000559037 LRRN4CLQ8ND94 238 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 SYTL5Q8TDW5 730 aaPredicted RBP6.78□□□□□ -1.32
CASC4-207ENST00000559037 ALPK1Q96QP1 1244 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 CRBNQ96SW2 442 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 PODXL2Q9NZ53 605 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 DUSP13Q9UII6 198 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 SLC12A7Q9Y666 1083 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 ANKRD26Q9UPS8 1709 aa6.78□□□□□ -1.32
CASC4-207ENST00000559037 LRP5O75197 1615 aa6.77□□□□□ -1.33
CASC4-207ENST00000559037 IL2RBP14784 551 aa6.77□□□□□ -1.33
CASC4-207ENST00000559037 GUCY2CP25092 1073 aa6.77□□□□□ -1.33
CASC4-207ENST00000559037 HOXC9P31274 260 aa6.77□□□□□ -1.33
CASC4-207ENST00000559037 GDNFP39905 211 aa6.77□□□□□ -1.33
CASC4-207ENST00000559037 CLEC16AQ2KHT3 1053 aa6.77□□□□□ -1.33
CASC4-207ENST00000559037 C19orf47Q8N9M1 422 aaKnown RBP6.77□□□□□ -1.33
CASC4-207ENST00000559037 SYTL4Q96C24 671 aaPredicted RBP6.77□□□□□ -1.33
CASC4-207ENST00000559037 NHSQ6T4R5 1651 aa6.77□□□□□ -1.33
CASC4-207ENST00000559037 KCNQ2O43526 872 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 ESR1P03372 595 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 HSPA5P11021 654 aaKnown RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 ENDOUP21128 410 aaKnown RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 AFMP43652 599 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 AMPHP49418 695 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 NMIQ13287 307 aaPredicted RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 R3HDM1Q15032 1099 aaKnown RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 NBPF9Q3BBW0 867 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 BBS9Q3SYG4 887 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 KRTAP1-3Q8IUG1 177 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 ZNF655Q8N720 491 aaPredicted RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 DAGLBQ8NCG7 672 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 LTV1Q96GA3 475 aaPredicted RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 SLC6A18Q96N87 628 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 FMNL2Q96PY5 1086 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 GINM1Q9NU53 330 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 SUCOQ9UBS9 1254 aaKnown RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 EFR3BQ9Y2G0 817 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 INPP5FQ9Y2H2 1132 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 VIRMAQ69YN4 1812 aaKnown RBP6.76□□□□□ -1.33
CASC4-207ENST00000559037 LY75O60449 1722 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 TNS2Q63HR2 1409 aa6.76□□□□□ -1.33
CASC4-207ENST00000559037 KIF24Q5T7B8 1368 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 PAPLNO95428 1278 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 RAC2P15153 192 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 POLR2BP30876 1174 aaKnown RBP6.75□□□□□ -1.33
CASC4-207ENST00000559037 GNL2Q13823 731 aaKnown RBP6.75□□□□□ -1.33
CASC4-207ENST00000559037 RRS1Q15050 365 aaKnown RBP6.75□□□□□ -1.33
CASC4-207ENST00000559037 HSP90AB2PQ58FF8 381 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 NBPF6Q5VWK0 638 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 FBXW10Q5XX13 1052 aa6.75□□□□□ -1.33
CASC4-207ENST00000559037 CREG2Q8IUH2 290 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms