RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 FRMPD3Q5JV73 1810 aa7.09□□□□□ -1.27
CTDSPL2-204ENST00000558966 RPTORQ8N122 1335 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 SMCHD1A6NHR9 2005 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 TMEM232C9JQI7 657 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 STRNO43815 780 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 COBLO75128 1261 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 SLC25A27O95847 323 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 STAT3P40763 770 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 SLC1A4P43007 532 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 SH3BP2P78314 561 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 CACNB2Q08289 660 aaPredicted RBP7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 IMMTQ16891 758 aaKnown RBP7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 TRAF7Q6Q0C0 670 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 UBE2Q1Q7Z7E8 422 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 TRMT44Q8IYL2 757 aaKnown RBP7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 ABRAQ8N0Z2 381 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 RUFY2Q8WXA3 655 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 ESR2Q92731 530 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 KIFC2Q96AC6 838 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 DEFB118Q96PH6 123 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 TMEM47Q9BQJ4 181 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 CTNNA3Q9UI47 895 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 RIPK3Q9Y572 518 aa7.09□□□□□ -1.28
CTDSPL2-204ENST00000558966 DNAH12Q6ZR08 3092 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 B4E1Z4 1266 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 ATP2A1O14983 1001 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 SGPL1O95470 568 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 TOP1P11387 765 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 STAT2P52630 851 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 ELOAQ14241 798 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 EML3Q32P44 896 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 OXLD1Q5BKU9 147 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 SNRNP48Q6IEG0 339 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 KCTD1Q719H9 257 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 DCAF4Q8WV16 495 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZKSCAN3Q9BRR0 538 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 TEX13BQ9BXU2 312 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 RAVER2Q9HCJ3 691 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 ISY1Q9ULR0 285 aaKnown RBP7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 MTMR7Q9Y216 660 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 TAF6LQ9Y6J9 622 aa7.08□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZNF536O15090 1300 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 PLA2G6O60733 806 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZBED4O75132 1171 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CYP21A2P08686 494 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 SNHG28P0DPA3 235 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 PDHBP11177 359 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 FCER1AP12319 257 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CCND3P30281 292 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CYP2C19P33261 490 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 COPB2P35606 906 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 NT5C2P49902 561 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 IKQ13123 557 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 PTK7Q13308 1070 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CCDC96Q2M329 555 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 MAP7D1Q3KQU3 841 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 BMP2KLQ5H9B9 411 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 PLA2G2CQ5R387 149 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 DPP9Q86TI2 863 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 FAM160B2Q86V87 743 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CPXCR1Q8N123 301 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CHURC1Q8WUH1 139 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CCDC136Q96JN2 1154 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 MMP19Q99542 508 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZSWIM5Q9P217 1185 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 DOLKQ9UPQ8 538 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 MCM3APO60318 1980 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 TNKSO95271 1327 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 FRMPD2Q68DX3 1309 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 ALPK3Q96L96 1907 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 RNF223E7ERA6 249 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 FARP2O94887 1054 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 PGK2P07205 417 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CYBAP13498 195 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 SLC16A2P36021 539 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 OAZ1P54368 228 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 SNAP25P60880 206 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CLDN10P78369 228 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 KCNC4Q03721 635 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZNF543Q08ER8 600 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 KCNA1Q09470 495 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 MFSD14CQ5VZR4 134 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 OLFML2BQ68BL8 750 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 TTBK2Q6IQ55 1244 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 BTNL9Q6UXG8 535 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 DGKHQ86XP1 1220 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 ENAHQ8N8S7 591 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 TRPV1Q8NER1 839 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 MAP4K1Q92918 833 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 MAML3Q96JK9 1138 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 TTC14Q96N46 770 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 ZSCAN10Q96SZ4 725 aaPredicted RBP7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 ESYT1Q9BSJ8 1104 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 CNNM2Q9H8M5 875 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 PRR12Q9ULL5 1215 aa7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 RANBP2P49792 3224 aaKnown RBP7.07□□□□□ -1.28
CTDSPL2-204ENST00000558966 TFRCP02786 760 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 TAL1P17542 331 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 RAB15P59190 212 aa7.06□□□□□ -1.28
CTDSPL2-204ENST00000558966 KCTD2Q14681 263 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms