RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 KIAA0754O94854 1291 aa13.47□□□□□ -0.25
SEC11A-206ENST00000558924 EPS15P42566 896 aa13.47□□□□□ -0.25
SEC11A-206ENST00000558924 PMS1P54277 932 aaKnown RBP13.47□□□□□ -0.25
SEC11A-206ENST00000558924 TICAM2Q86XR7 235 aa13.47□□□□□ -0.25
SEC11A-206ENST00000558924 MLXIPQ9HAP2 919 aa13.47□□□□□ -0.25
SEC11A-206ENST00000558924 ADD3Q9UEY8 706 aaKnown RBP13.47□□□□□ -0.25
SEC11A-206ENST00000558924 SHTN1A0MZ66 631 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 EBAG9O00559 213 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 GTPBP6O43824 516 aaPredicted RBP13.46□□□□□ -0.25
SEC11A-206ENST00000558924 TDP2O95551 362 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 PPP2R5BQ15173 497 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 FCHSD1Q86WN1 690 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 KLHL7Q8IXQ5 586 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 SEPT12Q8IYM1 358 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 PRPF38AQ8NAV1 312 aaKnown RBP13.46□□□□□ -0.25
SEC11A-206ENST00000558924 SNX29Q8TEQ0 813 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 PKD2L1Q9P0L9 805 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 POTEB2H3BUK9 544 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 NDUFAB1O14561 156 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 MOCS3O95396 460 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 PLEKP08567 350 aaPredicted RBP13.46□□□□□ -0.25
SEC11A-206ENST00000558924 DNAAF5Q86Y56 855 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 SUGP1Q8IWZ8 645 aaKnown RBP13.46□□□□□ -0.25
SEC11A-206ENST00000558924 DISC1Q9NRI5 854 aa13.46□□□□□ -0.25
SEC11A-206ENST00000558924 COL1A1P02452 1464 aaPredicted RBP13.46□□□□□ -0.25
SEC11A-206ENST00000558924 A0A087WUV0 522 aaPredicted RBP13.46□□□□□ -0.26
SEC11A-206ENST00000558924 PPP1R3GB7ZBB8 358 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 RASA1P20936 1047 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 FUT2Q10981 343 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 TCERG1LQ5VWI1 586 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 TRIM31Q9BZY9 425 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 RMND1Q9NWS8 449 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 PCDHA6Q9UN73 950 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 PACSIN2Q9UNF0 486 aaPredicted RBP13.46□□□□□ -0.26
SEC11A-206ENST00000558924 PCDHA8Q9Y5H6 950 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 CAPN7Q9Y6W3 813 aa13.46□□□□□ -0.26
SEC11A-206ENST00000558924 SKAP2O75563 359 aaPredicted RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 GDF11O95390 407 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 AKR1B1P15121 316 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 ERCC5P28715 1186 aaPredicted RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 ACTN3Q08043 901 aaPredicted RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 PDCLQ13371 301 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 SLC30A10Q6XR72 485 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.45□□□□□ -0.261e-8■■□□□ 12.4
SEC11A-206ENST00000558924 A0A1B0GTH6 734 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L15C9J2P7 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L13C9JLJ4 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L11C9JVI0 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L18D6R9N7 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L22D6RA61 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L17D6RBQ6 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L19D6RCP7 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L20D6RJB6 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 SYF2O95926 243 aaKnown RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 GNA11P29992 359 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 UBXN2AP68543 259 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L24Q0WX57 530 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 CALCRLQ16602 461 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 CCDC40Q4G0X9 1142 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 USP17L6PQ6QN14 398 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 RRAGAQ7L523 313 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 RPAINQ86UA6 219 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 HDAC7Q8WUI4 952 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 LACRTQ9GZZ8 138 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 MKRN1Q9UHC7 482 aaKnown RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 PCDHAC2Q9Y5I4 1007 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 CCDC189A1A4V9 331 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 OR52Z1P0C646 297 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 PAX7P23759 505 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 CYLC1P35663 651 aaPredicted RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 ZNF76P36508 570 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 LLGL1Q15334 1064 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 SHROOM1Q2M3G4 852 aaPredicted RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 TMED8Q6PL24 325 aaPredicted RBP13.45□□□□□ -0.26
SEC11A-206ENST00000558924 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 MTRQ99707 1265 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 KCNQ5Q9NR82 932 aa13.45□□□□□ -0.26
SEC11A-206ENST00000558924 TMCO5BA8MYB1 307 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 PAFAH1B1P43034 410 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 STK4Q13043 487 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 PRPF4BQ13523 1007 aaKnown RBP13.44□□□□□ -0.26
SEC11A-206ENST00000558924 TMEM266Q2M3C6 531 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 ADAT2Q7Z6V5 191 aaKnown RBP13.44□□□□□ -0.26
SEC11A-206ENST00000558924 NEK8Q86SG6 692 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
SEC11A-206ENST00000558924 RBM17Q96I25 401 aaKnown RBP13.44□□□□□ -0.26
SEC11A-206ENST00000558924 LRRC4BQ9NT99 713 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 MAD2L2Q9UI95 211 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 PARP4Q9UKK3 1724 aaKnown RBP13.44□□□□□ -0.26
SEC11A-206ENST00000558924 AKAP11Q9UKA4 1901 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 MEIS1O00470 390 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 CHMP2AO43633 222 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 CYP4A11Q02928 519 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 PLS1Q14651 629 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 TCP11X2Q5H9J9 407 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 FAM43BQ6ZT52 329 aaPredicted RBP13.44□□□□□ -0.26
SEC11A-206ENST00000558924 CEP57Q86XR8 500 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 PANX2Q96RD6 677 aa13.44□□□□□ -0.26
SEC11A-206ENST00000558924 PPANQ9NQ55 473 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms