RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 SPATC1LQ9H0A9 340 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 CBX8Q9HC52 389 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 ANO10Q9NW15 660 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 SEC63Q9UGP8 760 aaKnown RBP8.75□□□□□ -1.01
LRRC28-211ENST00000558890 FBXO40Q9UH90 709 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 PRR12Q9ULL5 1215 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 RIPK3Q9Y572 518 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 PTCH2Q9Y6C5 1203 aa8.75□□□□□ -1.01
LRRC28-211ENST00000558890 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.75□□□□□ -1.01
LRRC28-211ENST00000558890 LOC102724159A0A0B4J2E5 919 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 SPTLC2O15270 562 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 CYTH3O43739 400 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 SLC25A27O95847 323 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 ICAM1P05362 532 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 SCG2P13521 617 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 FLT3LGP49771 235 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 ZNF165P49910 485 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 FXR2P51116 673 aaKnown RBP eCLIP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 PRMT2P55345 433 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 CCNA1P78396 465 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 AKAP17AQ02040 695 aaKnown RBP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 PRKCZQ05513 592 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 SSRP1Q08945 709 aaKnown RBP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 IRF5Q13568 498 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 PWP2Q15269 919 aaKnown RBP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 SAFBQ15424 915 aaKnown RBP eCLIP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 ADALQ6DHV7 355 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 KCTD1Q719H9 257 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 GPR142Q7Z601 462 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 RIOX2Q8IUF8 465 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 CEP57L1Q8IYX8 460 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 ADGRF4Q8IZF3 695 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 TNS4Q8IZW8 715 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 STAG2Q8N3U4 1231 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 SRBD1Q8N5C6 995 aaKnown RBP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 AMNQ9BXJ7 453 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 TEX13BQ9BXU2 312 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 NAT10Q9H0A0 1025 aaKnown RBP8.74□□□□□ -1.01
LRRC28-211ENST00000558890 JMJD4Q9H9V9 463 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 PLXNB2O15031 1838 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 ABCB11O95342 1321 aa8.74□□□□□ -1.01
LRRC28-211ENST00000558890 BAZ2BQ9UIF8 2168 aaKnown RBP8.73□□□□□ -1.01
LRRC28-211ENST00000558890 MGAMO43451 1857 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 BECN2A8MW95 431 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 PIK3CDO00329 1044 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 COBLO75128 1261 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 ZBED4O75132 1171 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 PPFIA3O75145 1194 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 PLEKHA8P1O95397 391 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 HOXC6P09630 235 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 XRCC5P13010 732 aaKnown RBP8.73□□□□□ -1.01
LRRC28-211ENST00000558890 ERCC3P19447 782 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 PTPREP23469 700 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 CALML3P27482 149 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 MAPK4P31152 587 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 STAT3P40763 770 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 TERF1P54274 439 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 FCGRTP55899 365 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 GRB14Q14449 540 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 CDC37Q16543 378 aaPredicted RBP8.73□□□□□ -1.01
LRRC28-211ENST00000558890 ANO1Q5XXA6 986 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 KRT40Q6A162 431 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 PLEKHH3Q7Z736 793 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 LUZP1Q86V48 1076 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 ABRAQ8N0Z2 381 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 DAGLBQ8NCG7 672 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 LINC00301Q8NCQ3 95 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 CHST13Q8NET6 341 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 PAGR1Q9BTK6 254 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 MYL10Q9BUA6 226 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 FTOQ9C0B1 505 aaKnown RBP eCLIP8.73□□□□□ -1.01
LRRC28-211ENST00000558890 GOLPH3LQ9H4A5 285 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 BARHL2Q9NY43 387 aa8.73□□□□□ -1.01
LRRC28-211ENST00000558890 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.73□□□□□ -1.01
LRRC28-211ENST00000558890 SLC15A5A6NIM6 579 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 STRNO43815 780 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 ECM2O94769 699 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-211ENST00000558890 RXRAP19793 462 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 GNA11P29992 359 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 SLC16A2P36021 539 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 SNAP25P60880 206 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 TPM4P67936 248 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 IKQ13123 557 aaPredicted RBP8.72□□□□□ -1.01
LRRC28-211ENST00000558890 KIF22Q14807 665 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 PKN1Q16512 942 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 FBXO11Q86XK2 927 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 MCF2L2Q86YR7 1114 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 DRC7Q8IY82 874 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 PXYLP1Q8TE99 480 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 PIBF1Q8WXW3 757 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 SPOCK2Q92563 424 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 ZNF333Q96JL9 665 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 AGBL1Q96MI9 1066 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 SDF4Q9BRK5 362 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 SLC26A6Q9BXS9 759 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 UBA5Q9GZZ9 404 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 ZMYND12Q9H0C1 365 aa8.72□□□□□ -1.01
LRRC28-211ENST00000558890 DNAJC25Q9H1X3 360 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms