RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 PSTPIP2Q9H939 334 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 PXMP2Q9NR77 195 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 BARHL2Q9NY43 387 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 RBM27Q9P2N5 1060 aaKnown RBP14.39□□□□□ -0.11
LRRC28-206ENST00000558471 OGDHLQ9ULD0 1010 aa14.39□□□□□ -0.11
LRRC28-206ENST00000558471 B4DLN1 442 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 hCG_1984214I3L0E3 225 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 PIK3CDO00329 1044 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 MSCO60682 206 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 DTNBO60941 627 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 AKR1A1P14550 325 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 EIF2AK2P19525 551 aaKnown RBP14.38□□□□□ -0.11
LRRC28-206ENST00000558471 MRPL12P52815 198 aaKnown RBP14.38□□□□□ -0.11
LRRC28-206ENST00000558471 PDE4DQ08499 809 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 SSRP1Q08945 709 aaKnown RBP14.38□□□□□ -0.11
LRRC28-206ENST00000558471 CCDC144BQ3MJ40 725 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 TAPT1Q6NXT6 567 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 CPLX2Q6PUV4 134 aaKnown RBP14.38□□□□□ -0.11
LRRC28-206ENST00000558471 FBXO16Q8IX29 292 aaPredicted RBP14.38□□□□□ -0.11
LRRC28-206ENST00000558471 ZNF713Q8N859 430 aaPredicted RBP14.38□□□□□ -0.11
LRRC28-206ENST00000558471 SMARCC2Q8TAQ2 1214 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 CUL5Q93034 780 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 IWS1Q96ST2 819 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 MPHOSPH6Q99547 160 aaKnown RBP14.38□□□□□ -0.11
LRRC28-206ENST00000558471 PDGFCQ9NRA1 345 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 FAM184BQ9ULE4 1060 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 LIMCH1Q9UPQ0 1083 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 KIAA1217Q5T5P2 1943 aa14.38□□□□□ -0.11
LRRC28-206ENST00000558471 SMCO2A6NFE2 343 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 ADCY6O43306 1168 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 CTDNEP1O95476 244 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 NR3C2P08235 984 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 CAPN2P17655 700 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 UBE2SQ16763 222 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 TRIM22Q8IYM9 498 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 GTF3C6Q969F1 213 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 LENG1Q96BZ8 264 aaPredicted RBP14.37□□□□□ -0.11
LRRC28-206ENST00000558471 PDCD2LQ9BRP1 358 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 VTA1Q9NP79 307 aa14.37□□□□□ -0.11
LRRC28-206ENST00000558471 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-206ENST00000558471 RARBP10826 455 aa14.36□□□□□ -0.11
LRRC28-206ENST00000558471 ADCYAP1R1P41586 468 aa14.36□□□□□ -0.11
LRRC28-206ENST00000558471 MNX1P50219 401 aaPredicted RBP14.36□□□□□ -0.11
LRRC28-206ENST00000558471 PGM5Q15124 567 aa14.36□□□□□ -0.11
LRRC28-206ENST00000558471 STXBP2Q15833 593 aa14.36□□□□□ -0.11
LRRC28-206ENST00000558471 TMEM63BQ5T3F8 832 aa14.36□□□□□ -0.11
LRRC28-206ENST00000558471 PPP1R18Q6NYC8 613 aa14.36□□□□□ -0.11
LRRC28-206ENST00000558471 RIC8AQ9NPQ8 531 aa14.36□□□□□ -0.11
LRRC28-206ENST00000558471 RBM47A0AV96 593 aaKnown RBP14.35□□□□□ -0.11
LRRC28-206ENST00000558471 ADAMTS3O15072 1205 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 DUSP11O75319 330 aaKnown RBP14.35□□□□□ -0.11
LRRC28-206ENST00000558471 CDKL5O76039 1030 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 DEXIO95424 95 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 MYCLP12524 364 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-206ENST00000558471 SMPD1P17405 629 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 ADCY7P51828 1080 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 TNFAIP2Q03169 654 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 ST3GAL1Q11201 340 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 IQSEC1Q6DN90 963 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 UBE2Q1Q7Z7E8 422 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 VSIG10LQ86VR7 867 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 ANKLE1Q8NAG6 615 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 IL31RAQ8NI17 732 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 ZFP91Q96JP5 570 aaPredicted RBP14.35□□□□□ -0.11
LRRC28-206ENST00000558471 AIFM3Q96NN9 605 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 ZMYND12Q9H0C1 365 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 VPS54Q9P1Q0 977 aa14.35□□□□□ -0.11
LRRC28-206ENST00000558471 ESYT2A0FGR8 921 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 ST18O60284 1047 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 EIF3JO75822 258 aaKnown RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 FARP2O94887 1054 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 PGK1P00558 417 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 PTGS1P23219 599 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 GJC2Q5T442 439 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 SEPT14Q6ZU15 432 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 ARRDC4Q8NCT1 418 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 DIS3LQ8TF46 1054 aaKnown RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 CCDC12Q8WUD4 166 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 PAWRQ96IZ0 340 aaKnown RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 ZSCAN31Q96LW9 406 aaPredicted RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 XPNPEP3Q9NQH7 507 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 TMEM260Q9NX78 707 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 PCDHA6Q9UN73 950 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 GNEQ9Y223 722 aaKnown RBP14.34□□□□□ -0.11
LRRC28-206ENST00000558471 PCDHA8Q9Y5H6 950 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 MYH7BA7E2Y1 1941 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 FRMPD4Q14CM0 1322 aa14.34□□□□□ -0.11
LRRC28-206ENST00000558471 SPDYE3A6NKU9 549 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 ADAMTS4O75173 837 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 CD2BP2O95400 341 aaKnown RBP14.33□□□□□ -0.12
LRRC28-206ENST00000558471 MYCNP04198 464 aaPredicted RBP14.33□□□□□ -0.12
LRRC28-206ENST00000558471 FDPSP14324 419 aaKnown RBP14.33□□□□□ -0.12
LRRC28-206ENST00000558471 CCND2P30279 289 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 CLK2P49760 499 aaKnown RBP14.33□□□□□ -0.12
LRRC28-206ENST00000558471 IRX5P78411 483 aaPredicted RBP14.33□□□□□ -0.12
LRRC28-206ENST00000558471 MRPS9P82933 396 aaKnown RBP14.33□□□□□ -0.12
LRRC28-206ENST00000558471 LRRC41Q15345 812 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 TEX2Q8IWB9 1127 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 CCDC83Q8IWF9 413 aa14.33□□□□□ -0.12
LRRC28-206ENST00000558471 NSUN7Q8NE18 718 aaKnown RBP14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms