RNA–Protein interactions for RNA: ENST00000558469.5

CUX1-216, Transcript of cut like homeobox 1, humanhuman

TSL 4

Gene CUX1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-216ENST00000558469 LACTBP83111 547 aaPredicted RBP10.99□□□□□ -0.65
CUX1-216ENST00000558469 SP3Q02447 781 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 GHRHRQ02643 423 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 KIF22Q14807 665 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 PIK3AP1Q6ZUJ8 805 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.99□□□□□ -0.65
CUX1-216ENST00000558469 KRT25Q7Z3Z0 450 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 NOSTRINQ8IVI9 506 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 SYTL5Q8TDW5 730 aaPredicted RBP10.99□□□□□ -0.65
CUX1-216ENST00000558469 TNFRSF25Q93038 417 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 PURBQ96QR8 312 aaKnown RBP10.99□□□□□ -0.65
CUX1-216ENST00000558469 MAF1Q9H063 256 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 CHMP5Q9NZZ3 219 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 COL20A1Q9P218 1284 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 TSKSQ9UJT2 592 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 CIZ1Q9ULV3 898 aaPredicted RBP10.99□□□□□ -0.65
CUX1-216ENST00000558469 CASP8AP2Q9UKL3 1982 aa10.99□□□□□ -0.65
CUX1-216ENST00000558469 FAM205CA6NFA0 338 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 POTEB2H3BUK9 544 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 TNPO2O14787 897 aaKnown RBP10.98□□□□□ -0.65
CUX1-216ENST00000558469 F13A1P00488 732 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 FOSP01100 380 aaPredicted RBP10.98□□□□□ -0.65
CUX1-216ENST00000558469 PTPREP23469 700 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 ADORA2AP29274 412 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 CTGFP29279 349 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 PSMC4P43686 418 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 FCGRTP55899 365 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 CNTN2Q02246 1040 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 RESTQ13127 1097 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 EARS2Q5JPH6 523 aaKnown RBP10.98□□□□□ -0.65
CUX1-216ENST00000558469 MCTP2Q6DN12 878 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 BRAPQ7Z569 592 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 TEX2Q8IWB9 1127 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 ABRAQ8N0Z2 381 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 TAAR1Q96RJ0 339 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 ARHGAP39Q9C0H5 1083 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 ZSCAN16Q9H4T2 348 aaPredicted RBP10.98□□□□□ -0.65
CUX1-216ENST00000558469 WBP1LQ9NX94 342 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 LRRC37A2A6NM11 1700 aa10.98□□□□□ -0.65
CUX1-216ENST00000558469 SLC15A5A6NIM6 579 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 GALR2O43603 387 aaPredicted RBP10.97□□□□□ -0.65
CUX1-216ENST00000558469 UBXN2AP68543 259 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 AP3B2Q13367 1082 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 GRB14Q14449 540 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 NONOQ15233 471 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■■□□ 15.5
CUX1-216ENST00000558469 INF2Q27J81 1249 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 FOXD4L6Q3SYB3 417 aaPredicted RBP10.97□□□□□ -0.65
CUX1-216ENST00000558469 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 FOXD4L3Q6VB84 417 aaPredicted RBP10.97□□□□□ -0.65
CUX1-216ENST00000558469 DPP9Q86TI2 863 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 CD99L2Q8TCZ2 262 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 TBCKQ8TEA7 893 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 ANO3Q9BYT9 981 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 EHMT1Q9H9B1 1298 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 DOCK5Q9H7D0 1870 aa10.97□□□□□ -0.65
CUX1-216ENST00000558469 DNAJC25-GNG10A0A024R161 153 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 SOWAHBA6NEL2 793 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 FKTNO75072 461 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 COBLO75128 1261 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 EIF2AK2P19525 551 aaKnown RBP10.96□□□□□ -0.65
CUX1-216ENST00000558469 ATP2B1P20020 1258 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 MORN1Q5T089 497 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 FAM173BQ6P4H8 233 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 FAM133AQ8N9E0 248 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 DNERQ8NFT8 737 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 NSUN6Q8TEA1 469 aaKnown RBP10.96□□□□□ -0.65
CUX1-216ENST00000558469 ZNF296Q8WUU4 475 aaPredicted RBP10.96□□□□□ -0.65
CUX1-216ENST00000558469 NUDT12Q9BQG2 462 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 PXMP2Q9NR77 195 aa10.96□□□□□ -0.65
CUX1-216ENST00000558469 ADD3Q9UEY8 706 aaKnown RBP10.96□□□□□ -0.65
CUX1-216ENST00000558469 RPTORQ8N122 1335 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 MYCLP12524 364 aaPredicted RBP10.95□□□□□ -0.66
CUX1-216ENST00000558469 SREBF1P36956 1147 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 TOB1P50616 345 aaPredicted RBP10.95□□□□□ -0.66
CUX1-216ENST00000558469 ALDH5A1P51649 535 aaPredicted RBP10.95□□□□□ -0.66
CUX1-216ENST00000558469 ARHGAP4P98171 946 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 CAP1Q01518 475 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 PGM5Q15124 567 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 ZNF792Q3KQV3 632 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 MYSM1Q5VVJ2 828 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 JMYQ8N9B5 988 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 ERO1AQ96HE7 468 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 SLC5A4Q9NY91 659 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 GJD2Q9UKL4 321 aa10.95□□□□□ -0.66
CUX1-216ENST00000558469 NOL7Q9UMY1 257 aaKnown RBP10.95□□□□□ -0.66
CUX1-216ENST00000558469 DDX49Q9Y6V7 483 aaKnown RBP10.95□□□□□ -0.66
CUX1-216ENST00000558469 ASTN1O14525 1302 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 FRMPD4Q14CM0 1322 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 CCNT1O60563 726 aaKnown RBP10.94□□□□□ -0.66
CUX1-216ENST00000558469 NR3C2P08235 984 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 CCND2P30279 289 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 ZNF76P36508 570 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 RGS2P41220 211 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 USP11P51784 963 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 MAP2K5Q13163 448 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 NBR1Q14596 966 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 LETM2Q2VYF4 491 aa10.94□□□□□ -0.66
CUX1-216ENST00000558469 RILPL1Q5EBL4 403 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms