RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 RNF10Q8N5U6 811 aaKnown RBP18.1■□□□□ 0.49
SHMT2-232ENST00000557487 CASZ1Q86V15 1759 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 PAFAH1B1P43034 410 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 KCNQ4P56696 695 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 ASIC1P78348 528 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 C2orf54Q08AI8 447 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 SPTY2D1Q68D10 685 aaPredicted RBP18.1■□□□□ 0.49
SHMT2-232ENST00000557487 CENPPQ6IPU0 288 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 SPATA4Q8NEY3 305 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 LRWD1Q9UFC0 647 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 MINPP1Q9UNW1 487 aa18.1■□□□□ 0.49
SHMT2-232ENST00000557487 ROBO3Q96MS0 1386 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 ZNF831Q5JPB2 1677 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 PVALEFA0A1B0GWK0 134 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 STXBP3O00186 592 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 VEGFAP15692 232 aaPredicted RBP18.09■□□□□ 0.49
SHMT2-232ENST00000557487 MAN2A1Q16706 1144 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 INF2Q27J81 1249 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 VWA3BQ502W6 1294 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 GPKOWQ92917 476 aaPredicted RBP eCLIP18.09■□□□□ 0.49
SHMT2-232ENST00000557487 NUCKS1Q9H1E3 243 aaKnown RBP18.09■□□□□ 0.49
SHMT2-232ENST00000557487 STK17AQ9UEE5 414 aa18.09■□□□□ 0.49
SHMT2-232ENST00000557487 SSU72P8A0A1W2PR75 194 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 SHTN1A0MZ66 631 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 PP2D1A8MPX8 630 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 VGLL3A8MV65 326 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 EBAG9O00559 213 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 ADAMTS3O15072 1205 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 ZNF185O15231 689 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 MYBL2P10244 700 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 IRAK1P51617 712 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 KIF11P52732 1056 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 SKOR1P84550 965 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 CCDC181Q5TID7 509 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 SND1Q7KZF4 910 aaKnown RBP eCLIP18.08■□□□□ 0.492e-6■■□□□ 11.8
SHMT2-232ENST00000557487 CALML4Q96GE6 196 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 OSBPL9Q96SU4 736 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 CAPS2Q9BXY5 557 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 LRRC27Q9C0I9 530 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 ZMYND12Q9H0C1 365 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 STIM2Q9P246 746 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 MAD2L2Q9UI95 211 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 SIK3Q9Y2K2 1263 aa18.08■□□□□ 0.49
SHMT2-232ENST00000557487 ATXN2Q99700 1313 aaKnown RBP18.08■□□□□ 0.49
SHMT2-232ENST00000557487 ZNF263O14978 683 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 SMARCA1P28370 1054 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 GNA11P29992 359 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 TFAP4Q01664 338 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 LRRC63Q05C16 580 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 NONOQ15233 471 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHMT2-232ENST00000557487 TADA2BQ86TJ2 420 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 SPATS2Q86XZ4 545 aaKnown RBP18.08■□□□□ 0.48
SHMT2-232ENST00000557487 RUFY1Q96T51 708 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 SPZ1Q9BXG8 430 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 DEF6Q9H4E7 631 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 LUC7LQ9NQ29 371 aaKnown RBP18.08■□□□□ 0.48
SHMT2-232ENST00000557487 TFR2Q9UP52 801 aa18.08■□□□□ 0.48
SHMT2-232ENST00000557487 EIF3HO15372 352 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHMT2-232ENST00000557487 HSF2BPO75031 334 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 ATP6V1AP38606 617 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 CYP27A1Q02318 531 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 STK4Q13043 487 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 MAPK8IP2Q13387 824 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-232ENST00000557487 RASGRP4Q8TDF6 673 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 ANKRD2Q9GZV1 360 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 NDST4Q9H3R1 872 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 DUSP10Q9Y6W6 482 aa18.07■□□□□ 0.48
SHMT2-232ENST00000557487 PALM3A6NDB9 673 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-232ENST00000557487 AKR1B10O60218 316 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 ZMYND10O75800 440 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 KLK7P49862 253 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 C12orf60Q5U649 245 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 ICE2Q659A1 982 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 TYW1BQ6NUM6 668 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 UNC13DQ70J99 1090 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 HEATR3Q7Z4Q2 680 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 C2CD5Q86YS7 1000 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 GUF1Q8N442 669 aaKnown RBP18.06■□□□□ 0.48
SHMT2-232ENST00000557487 SYN2Q92777 582 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-232ENST00000557487 C6orf50Q9HD87 102 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 ARHGAP20Q9P2F6 1191 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 MYH1P12882 1939 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 HIBADHP31937 336 aaKnown RBP18.06■□□□□ 0.48
SHMT2-232ENST00000557487 ITPK1Q13572 414 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 SV2BQ7L1I2 683 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 POTEDQ86YR6 584 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 IFT20Q8IY31 132 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 C1orf131Q8NDD1 294 aaKnown RBP18.06■□□□□ 0.48
SHMT2-232ENST00000557487 RIN2Q8WYP3 895 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-232ENST00000557487 NOX5Q96PH1 765 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 LRRC1Q9BTT6 524 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 ZNF287Q9HBT7 754 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 IL17RBQ9NRM6 502 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 MCM9Q9NXL9 1143 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 CAPN6Q9Y6Q1 641 aa18.06■□□□□ 0.48
SHMT2-232ENST00000557487 RBAK-RBAKDNI3L0D1 243 aa18.05■□□□□ 0.48
SHMT2-232ENST00000557487 CYP2D6P10635 497 aa18.05■□□□□ 0.48
SHMT2-232ENST00000557487 MAGEA1P43355 309 aa18.05■□□□□ 0.48
SHMT2-232ENST00000557487 PSMD2Q13200 908 aa18.05■□□□□ 0.48
SHMT2-232ENST00000557487 SLC10A5Q5PT55 438 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms