RNA–Protein interactions for RNA: ENST00000557418.1

FOXA1-205, Transcript of forkhead box A1, humanhuman

TSL 3

Gene FOXA1, Length 392 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-205ENST00000557418 CTAGE5O15320 804 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 ZEB2O60315 1214 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 CLTBP09497 229 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 GRM4Q14833 912 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 SH3RF1Q7Z6J0 888 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 CATIPQ7Z7H3 387 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 TOX2Q96NM4 488 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 WDR11Q9BZH6 1224 aa24.43■■□□□ 1.5
FOXA1-205ENST00000557418 BAZ2BQ9UIF8 2168 aaKnown RBP24.42■■□□□ 1.5
FOXA1-205ENST00000557418 TRIM43BA6NCK2 446 aa24.42■■□□□ 1.5
FOXA1-205ENST00000557418 AK2P54819 239 aa24.42■■□□□ 1.5
FOXA1-205ENST00000557418 EVCP57679 992 aa24.42■■□□□ 1.5
FOXA1-205ENST00000557418 FSCN1Q16658 493 aaKnown RBP24.42■■□□□ 1.5
FOXA1-205ENST00000557418 ANKRD33Q7Z3H0 272 aa24.42■■□□□ 1.5
FOXA1-205ENST00000557418 TMTC2Q8N394 836 aa24.42■■□□□ 1.5
FOXA1-205ENST00000557418 BRF1Q92994 677 aa24.42■■□□□ 1.5
FOXA1-205ENST00000557418 TRIM43Q96BQ3 446 aaPredicted RBP24.42■■□□□ 1.5
FOXA1-205ENST00000557418 TROAPQ12815 778 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 DUSP28Q4G0W2 176 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 TMEM63BQ5T3F8 832 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 IL27Q8NEV9 243 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 BADQ92934 168 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 MTMR8Q96EF0 704 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 TMEM39AQ9NV64 488 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 BRPF3Q9ULD4 1205 aa24.41■■□□□ 1.5
FOXA1-205ENST00000557418 A0A0U1RQG5 324 aaPredicted RBP24.4■■□□□ 1.5
FOXA1-205ENST00000557418 RBM47A0AV96 593 aaKnown RBP24.4■■□□□ 1.5
FOXA1-205ENST00000557418 ZBTB5O15062 677 aa24.4■■□□□ 1.5
FOXA1-205ENST00000557418 TRAF1Q13077 416 aa24.4■■□□□ 1.5
FOXA1-205ENST00000557418 SYTL5Q8TDW5 730 aaPredicted RBP24.4■■□□□ 1.5
FOXA1-205ENST00000557418 TAAR1Q96RJ0 339 aa24.4■■□□□ 1.5
FOXA1-205ENST00000557418 PCDHA1Q9Y5I3 950 aa24.4■■□□□ 1.5
FOXA1-205ENST00000557418 MROH7Q68CQ1 1323 aa24.39■■□□□ 1.5
FOXA1-205ENST00000557418 ARVCFO00192 962 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 SOX1O00570 391 aaPredicted RBP24.39■■□□□ 1.49
FOXA1-205ENST00000557418 CABYRO75952 493 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 PTGS1P23219 599 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 EDNRBP24530 442 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 CDK7P50613 346 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 APOBRQ0VD83 1088 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 FAAP100Q0VG06 881 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 LRIT3Q3SXY7 679 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 CXCL17Q6UXB2 119 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 HOMER1Q86YM7 354 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 NSUN6Q8TEA1 469 aaKnown RBP24.39■■□□□ 1.49
FOXA1-205ENST00000557418 RIOX1Q9H6W3 641 aa24.39■■□□□ 1.49
FOXA1-205ENST00000557418 KIAA0355O15063 1070 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 CD2BP2O95400 341 aaKnown RBP24.38■■□□□ 1.49
FOXA1-205ENST00000557418 CFBP00751 764 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 RAG1P15918 1043 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 FGD1P98174 961 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 APOA5Q6Q788 366 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 ZNF654Q8IZM8 581 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 SCFD2Q8WU76 684 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 LRCH3Q96II8 777 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 RMDN3Q96TC7 470 aa24.38■■□□□ 1.49
FOXA1-205ENST00000557418 LARP6Q9BRS8 491 aaKnown RBP24.38■■□□□ 1.49
FOXA1-205ENST00000557418 CCDC69A6NI79 296 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 ANKRD1Q15327 319 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 NFXL1Q6ZNB6 911 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 PIGSQ96S52 555 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 IWS1Q96ST2 819 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 MAP3K14Q99558 947 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 MYL10Q9BUA6 226 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 TPCN1Q9ULQ1 816 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 LRRC37A2A6NM11 1700 aa24.37■■□□□ 1.49
FOXA1-205ENST00000557418 KLF18A0A0U1RQI7 1052 aa24.36■■□□□ 1.49
FOXA1-205ENST00000557418 NKRFO15226 690 aaKnown RBP eCLIP24.36■■□□□ 1.49
FOXA1-205ENST00000557418 PPP1R11O60927 126 aaPredicted RBP24.36■■□□□ 1.49
FOXA1-205ENST00000557418 DDAH1O94760 285 aa24.36■■□□□ 1.49
FOXA1-205ENST00000557418 PPP2R5BQ15173 497 aa24.36■■□□□ 1.49
FOXA1-205ENST00000557418 ARHGEF16Q5VV41 709 aa24.36■■□□□ 1.49
FOXA1-205ENST00000557418 OR6J1Q8NGC5 347 aa24.36■■□□□ 1.49
FOXA1-205ENST00000557418 CTCFLQ8NI51 663 aaPredicted RBP24.36■■□□□ 1.49
FOXA1-205ENST00000557418 MAP3K20Q9NYL2 800 aaKnown RBP24.36■■□□□ 1.49
FOXA1-205ENST00000557418 COL20A1Q9P218 1284 aa24.36■■□□□ 1.49
FOXA1-205ENST00000557418 SLC12A7Q9Y666 1083 aa24.36■■□□□ 1.49
FOXA1-205ENST00000557418 PNMA6FA0A0J9YX94 578 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 TLR3O15455 904 aaKnown RBP24.35■■□□□ 1.49
FOXA1-205ENST00000557418 CYTH3O43739 400 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 ST18O60284 1047 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 TXNP10599 105 aaKnown RBP24.35■■□□□ 1.49
FOXA1-205ENST00000557418 TTLL4Q14679 1199 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 STXBP2Q15833 593 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 SLC35G1Q2M3R5 365 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 BRDTQ58F21 947 aaPredicted RBP24.35■■□□□ 1.49
FOXA1-205ENST00000557418 SAMD3Q8N6K7 520 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 LTBP2Q14767 1821 aa24.35■■□□□ 1.49
FOXA1-205ENST00000557418 NID2Q14112 1375 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 ITGB8P26012 769 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 PDIA3P30101 505 aaKnown RBP24.34■■□□□ 1.49
FOXA1-205ENST00000557418 KIF5BP33176 963 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 CPT1AP50416 773 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 RCAN1P53805 252 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 ITGA7Q13683 1181 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 ZNF274Q96GC6 653 aaPredicted RBP24.34■■□□□ 1.49
FOXA1-205ENST00000557418 SEZ6LQ9BYH1 1024 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 POLR3EQ9NVU0 708 aa24.34■■□□□ 1.49
FOXA1-205ENST00000557418 OPLAHO14841 1288 aa24.33■■□□□ 1.49
FOXA1-205ENST00000557418 EIF2AK2P19525 551 aaKnown RBP24.33■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms