RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 IFT20Q8IY31 132 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 VPS37AQ8NEZ2 397 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 SMCR8Q8TEV9 937 aaPredicted RBP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 TCP11Q8WWU5 503 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 NLRP2Q9NX02 1062 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 TRPC6Q9Y210 931 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 C15orf41Q9Y2V0 281 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 PCDHB6Q9Y5E3 794 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 DUSP10Q9Y6W6 482 aa11.57□□□□□ -0.56
SUPT16H-207ENST00000557394 NRAPQ86VF7 1730 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 LGALS16A8MUM7 142 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 H7C1W4 665 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 LIN7AO14910 233 aaPredicted RBP11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 PPIP5K2O43314 1243 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 SMNDC1O75940 238 aaKnown RBP eCLIP11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 FAM153BP0C7A2 387 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 XBP1P17861 261 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 AFMP43652 599 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 PAK2Q13177 524 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 QPCTQ16769 361 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 FAM153CQ494X1 144 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 AKAP4Q5JQC9 854 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 LRIG3Q6UXM1 1119 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 CCHCR1Q8TD31 782 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 NSMCE1Q8WV22 266 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 OSBPL9Q96SU4 736 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 NUP58Q9BVL2 599 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 TTYH3Q9C0H2 523 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 FAM153AQ9UHL3 310 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 TBC1D2BQ9UPU7 963 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 HYOU1Q9Y4L1 999 aa11.56□□□□□ -0.56
SUPT16H-207ENST00000557394 PECAM1P16284 738 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 CASP1P29466 404 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 CDK17Q00537 523 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 TRAF1Q13077 416 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 PAK1Q13153 545 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 RBBP5Q15291 538 aaKnown RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 TSNAXIP1Q2TAA8 658 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 C8orf74Q6P047 294 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 MIS18BP1Q6P0N0 1132 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 DPH6Q7L8W6 267 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 RIC3Q7Z5B4 369 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 DIS3L2Q8IYB7 885 aaKnown RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 STAMBPL1Q96FJ0 436 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 ACSBG1Q96GR2 724 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 METTL22Q9BUU2 404 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 PPANQ9NQ55 473 aaKnown RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 RABL2AQ9UBK7 228 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 PRAMEF22A3QJZ6 481 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 NUTM2BA6NNL0 878 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 NUTM2EB1AL46 878 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 TACC1O75410 805 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 FMNL1O95466 1100 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 CARSP49589 748 aaKnown RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 KIF5AQ12840 1032 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 KCNB1Q14721 858 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 IRF2BP1Q8IU81 584 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 CACNA2D3Q8IZS8 1091 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 WHAMMQ8TF30 809 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 WASF1Q92558 559 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 HVCN1Q96D96 273 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 SPAG5Q96R06 1193 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 SLX1AQ9BQ83 275 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 NHEJ1Q9H9Q4 299 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 ZNF219Q9P2Y4 722 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 CORO1CQ9ULV4 474 aaPredicted RBP11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 PCDHGA4Q9Y5G9 962 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 NID2Q14112 1375 aa11.55□□□□□ -0.56
SUPT16H-207ENST00000557394 ZNF213O14771 459 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 BUB1BO60566 1050 aaPredicted RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 ADAMTS2O95450 1211 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 ZFYP08048 801 aaPredicted RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 HSPA9P38646 679 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 MRPS25P82663 173 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 SSRP1Q08945 709 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 SAFBQ15424 915 aaKnown RBP eCLIP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 CAPRIN2Q6IMN6 1127 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 CYB5R4Q7L1T6 521 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 LARGE2Q8N3Y3 721 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 CCDC155Q8N6L0 562 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 PARD3BQ8TEW8 1205 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 TSPYL2Q9H2G4 693 aaPredicted RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 SH2D4AQ9H788 454 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 PLCB1Q9NQ66 1216 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 CAPN6Q9Y6Q1 641 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 PDS5AQ29RF7 1337 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 BICDL2A1A5D9 508 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 ERICH2A1L162 156 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 MACROD2A1Z1Q3 448 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 H7C1D1 291 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 ZBTB43O43298 467 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 GLI1P08151 1106 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 GSTA1P08263 222 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 PARP1P09874 1014 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 IFIT1P09914 478 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 PRPHP41219 470 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 AIMP1Q12904 312 aaKnown RBP11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 MYO1EQ12965 1108 aa11.54□□□□□ -0.56
SUPT16H-207ENST00000557394 INF2Q27J81 1249 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms