RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 JDP2Q8WYK2 163 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 FMO2Q99518 471 aa9.55□□□□□ -0.88
SYNE3-205ENST00000557275 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 DIS3Q9Y2L1 958 aaKnown RBP9.55□□□□□ -0.88
SYNE3-205ENST00000557275 PTPN23Q9H3S7 1636 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 ICE2Q659A1 982 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 H7C1D1 291 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 PCGF5Q86SE9 256 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 ANKRD12Q6UB98 2062 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 PMLP29590 882 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 FBXO2Q9UK22 296 aaPredicted RBP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 RWDD3Q9Y3V2 267 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 SDSP20132 328 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 ARL2BPQ9Y2Y0 163 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 PDE1AP54750 535 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 MKRN3Q13064 507 aaKnown RBP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 KRT26Q7Z3Y9 468 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 PBKQ96KB5 322 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 NFKBIL1Q9UBC1 381 aaPredicted RBP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 GYG2O15488 501 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 TNNI1P19237 187 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 DDIT3P35638 169 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 CCT5P48643 541 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 CADPS2Q86UW7 1296 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 VPS16Q9H269 839 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 CDC25BP30305 580 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 ARMCX3Q9UH62 379 aaPredicted RBP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 SSH2Q76I76 1423 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 YWHAGP61981 247 aaKnown RBP eCLIP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 MRPL47Q9HD33 250 aaKnown RBP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 NFE2L3Q9Y4A8 694 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 RFC4P35249 363 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 TSPY1Q01534 308 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 LRRC8EQ6NSJ5 796 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 NGLY1Q96IV0 654 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 MAGEB5Q9BZ81 275 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 SMARCAL1Q9NZC9 954 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 PKD2L2Q9NZM6 624 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 GRM8O00222 908 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 ATP1A2P50993 1020 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 SLC9C2Q5TAH2 1124 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 NUGGCQ68CJ6 796 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 ZBTB8OSQ8IWT0 167 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 NELFBQ8WX92 580 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 ABHD8Q96I13 439 aa9.54□□□□□ -0.88
SYNE3-205ENST00000557275 CAB39Q9Y376 341 aaPredicted RBP9.54□□□□□ -0.88
SYNE3-205ENST00000557275 PGRMC1O00264 195 aaKnown RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 ADCK1Q86TW2 530 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 RHPN1Q8TCX5 695 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 PODXLO00592 558 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CEP78Q5JTW2 689 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 ACBD5Q5T8D3 534 aaPredicted RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 NSMCE4AQ9NXX6 385 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 LAD1O00515 517 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 APOA4P06727 396 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CA4P22748 312 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 GNPTABQ3T906 1256 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 BRD8Q9H0E9 1235 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 SELENONQ9NZV5 590 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 APOBEC2Q9Y235 224 aaKnown RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 KPNA7A9QM74 516 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 AARSP49588 968 aaKnown RBP eCLIP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 BEND3Q5T5X7 828 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 ARHGEF25Q86VW2 580 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 TEX2Q8IWB9 1127 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CEP95Q96GE4 821 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 OLA1Q9NTK5 396 aaKnown RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 LMCD1Q9NZU5 365 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 WDR64B1ANS9 1081 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 ATP2B4P23634 1241 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 TRADDQ15628 312 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CNGB3Q9NQW8 809 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 MED7O43513 233 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 KRT38O76015 456 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CYLC2Q14093 348 aaPredicted RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CAPRIN2Q6IMN6 1127 aaKnown RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 RPN1P04843 607 aaKnown RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 SPARCL1Q14515 664 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 HERC4Q5GLZ8 1057 aaPredicted RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 ITM2BQ9Y287 266 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 USTQ9Y2C2 406 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 EXOC1LA0A1B0GW35 172 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 UBXN8O00124 270 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 GUCY2FP51841 1108 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CNGA3Q16281 694 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 AKNAD1Q5T1N1 836 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 NLRP9Q7RTR0 991 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 TADA2BQ86TJ2 420 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 PDIK1LQ8N165 341 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 REXO1Q8N1G1 1221 aaKnown RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 NLRP3Q96P20 1036 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 RNF113AO15541 343 aaKnown RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 POLD1P28340 1107 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 PMS2P54278 862 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 CDR2LQ86X02 465 aaPredicted RBP9.53□□□□□ -0.88
SYNE3-205ENST00000557275 MYCT1Q8N699 235 aa9.53□□□□□ -0.88
SYNE3-205ENST00000557275 MORC2Q9Y6X9 1032 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms