RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 NFE2L3Q9Y4A8 694 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 XRCC6P12956 609 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEK9-210ENST00000557026 EEF1GP26641 437 aaKnown RBP13.07□□□□□ -0.32
NEK9-210ENST00000557026 PIK3CAP42336 1068 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 RASSF2P50749 326 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 APBA1Q02410 837 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 DYMQ7RTS9 669 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 PPP4R1Q8TF05 950 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 STMN2Q93045 179 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 ABCC3O15438 1527 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 HNRNPDLO14979 420 aaKnown RBP13.07□□□□□ -0.32
NEK9-210ENST00000557026 KIAA0391O15091 583 aaKnown RBP13.07□□□□□ -0.32
NEK9-210ENST00000557026 H2AFZP0C0S5 128 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 ADD2P35612 726 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 VPS72Q15906 364 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 CCDC62Q6P9F0 684 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 H2AFVQ71UI9 128 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 RAB44Q7Z6P3 723 aaPredicted RBP13.07□□□□□ -0.32
NEK9-210ENST00000557026 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.07□□□□□ -0.32
NEK9-210ENST00000557026 ERO1AQ96HE7 468 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
NEK9-210ENST00000557026 TCP1P17987 556 aaKnown RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 ARL6IP4Q66PJ3 421 aaKnown RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 CCDC105Q8IYK2 499 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 ST7Q9NRC1 585 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 ASAP1Q9ULH1 1129 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 MAP3K7O43318 606 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 AP3M2P53677 418 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 LRRC47Q8N1G4 583 aaKnown RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 UBLCP1Q8WVY7 318 aaPredicted RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 GJD4Q96KN9 370 aaPredicted RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 TTC25Q96NG3 672 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 RBSNQ9H1K0 784 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 ZCCHC11Q5TAX3 1644 aaKnown RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 PRPF3O43395 683 aaKnown RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 CRB1P82279 1406 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 PNMA6EA0A0J9YXQ4 647 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 PPFIA4O75335 1185 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 PHKA2P46019 1235 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 TTLL4Q14679 1199 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 PRPF38AQ8NAV1 312 aaKnown RBP13.06□□□□□ -0.32
NEK9-210ENST00000557026 TSC1Q92574 1164 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 SLF1Q9BQI6 1058 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 ZBED2Q9BTP6 218 aa13.06□□□□□ -0.32
NEK9-210ENST00000557026 RLBP1P12271 317 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 RPS12P25398 132 aaKnown RBP13.05□□□□□ -0.32
NEK9-210ENST00000557026 IFT81Q8WYA0 676 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 CRAMP1Q96RY5 1269 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 VCX3BQ9H321 246 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 ADCY9O60503 1353 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 CA4P22748 312 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 LRRC4Q9HBW1 653 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 ADCY10Q96PN6 1610 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 ROBO2Q9HCK4 1378 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 KRT3P12035 628 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 HSPA1LP34931 641 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 ARL4AP40617 200 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 COG7P83436 770 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 ARHGAP4P98171 946 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 WHAMMP3Q1A5X7 153 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 CACNA2D3Q8IZS8 1091 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 MICAL1Q8TDZ2 1067 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 RNF139Q8WU17 664 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 LARP4BQ92615 738 aaKnown RBP13.05□□□□□ -0.32
NEK9-210ENST00000557026 TRIM56Q9BRZ2 755 aaKnown RBP13.05□□□□□ -0.32
NEK9-210ENST00000557026 TIPINQ9BVW5 301 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 LSM14BQ9BX40 385 aaKnown RBP13.05□□□□□ -0.32
NEK9-210ENST00000557026 HAUS4Q9H6D7 363 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 NCOA3Q9Y6Q9 1424 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 HOXC6P09630 235 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 KCTD17Q8N5Z5 321 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 DDX50Q9BQ39 737 aaKnown RBP13.05□□□□□ -0.32
NEK9-210ENST00000557026 ZSWIM4Q9H7M6 989 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 RNF14Q9UBS8 474 aa13.05□□□□□ -0.32
NEK9-210ENST00000557026 INO80B-WBP1J3KQ70 363 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 CEP104O60308 925 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 FGAP02671 866 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 DDX5P17844 614 aaKnown RBP13.04□□□□□ -0.32
NEK9-210ENST00000557026 CYP2J2P51589 502 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 RBM10P98175 930 aaKnown RBP13.04□□□□□ -0.32
NEK9-210ENST00000557026 ADAM9Q13443 819 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 CASC4Q6P4E1 433 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 NSUN6Q8TEA1 469 aaKnown RBP13.04□□□□□ -0.32
NEK9-210ENST00000557026 IFIH1Q9BYX4 1025 aaKnown RBP13.04□□□□□ -0.32
NEK9-210ENST00000557026 LZTFL1Q9NQ48 299 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 TLDC2A0PJX2 215 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 STXBP3O00186 592 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 MYL7Q01449 175 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 NELFCDQ8IXH7 590 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 EAF2Q96CJ1 260 aaPredicted RBP13.04□□□□□ -0.32
NEK9-210ENST00000557026 CEP170P1Q96L14 293 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 KATNAL1Q9BW62 490 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 USTQ9Y2C2 406 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 C19orf81C9J6K1 198 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 CYP2E1P05181 493 aaPredicted RBP13.04□□□□□ -0.32
NEK9-210ENST00000557026 SPATA1Q5VX52 437 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 MAEAQ7L5Y9 396 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 SDCCAG8Q86SQ7 713 aaPredicted RBP13.04□□□□□ -0.32
NEK9-210ENST00000557026 TADA2BQ86TJ2 420 aa13.04□□□□□ -0.32
NEK9-210ENST00000557026 RPF1Q9H9Y2 349 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms